Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0945 ATGGTATCAAAAAACCCGAACCCGAACCCGACACCCGAGGGCTTCTACTTGGATCCCAATGGCATGACCCGAACGGGTCTCAGTCCCTTCGCCTCCGTCACCACCGCCGAGTCACCGGTTGATTCTGCCGCGGTTTTGTCGGAGGATGCAGCCAAGAAAATCCGGAAGCCATACACTATCACTAAGTCAAGGGAGAATTGGACCGAACCAGAACATGACAAGTTCCTTGAAGCTCTTCAGCTGTTTGATCGTGACTGGAAAAAGATTGAAGCATTTGTTGGATCAAAGACAGCAATACAGATACGTAGCCATGCACAGAAATACTTTTTAAAAGTTCAGAAGAGTGGGACGAATGAACATCTTCCCCCACCCAGACCTAAGAGAAAAGCTGCCCATCCGTATCCTCAGAAAGCTTCAAAAAATGCTCCTGTACTCTTACAAGTATCAGGACCTTTTGAATCTCCATCTGCTTTGCTTGAGCCTGGATGTATCCTGAAGCATGACTCCCCGTCCCCAGCAATGCTTAAAACTCCTATTAAGAACACTTTGGTGCCTTCCAGGTCAAACACCACTTTGCAAGCAACTAATCTATCACATGTGCCCAAAGTGAATAATTCTTGCAGTAGCAGTGAGAGCACTCTTGGAGTGAGGCCAGTTGGTGAGTTTAATAGTCAAGGGAATAATAGCCATTCATTGAGAGTTCTTCCAGATTTTACTCATGTATACAGCTTCATTGGTAGTGTATTTGATCCAAATGCAACAGAGCATTTGCAGAAGCTAAAAAAGATGGACCGCATAGATGTTGAGACGGTTCTATTGTTGATGAGAAACCTGTCAATCAATTTAACTAGCCCAGATTTTGAGGATCATAGAAAGCTGCTTTCATCATATGAGGTTGAACAGGAGACAGATAGCTATATGAATGCCGAAAGACCCGTGTCCGACGAGCAGTTGAAGAGTGTTATTTAG 969 0.4469 MVSKNPNPNPTPEGFYLDPNGMTRTGLSPFASVTTAESPVDSAAVLSEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQLFDRDWKKIEAFVGSKTAIQIRSHAQKYFLKVQKSGTNEHLPPPRPKRKAAHPYPQKASKNAPVLLQVSGPFESPSALLEPGCILKHDSPSPAMLKTPIKNTLVPSRSNTTLQATNLSHVPKVNNSCSSSESTLGVRPVGEFNSQGNNSHSLRVLPDFTHVYSFIGSVFDPNATEHLQKLKKMDRIDVETVLLLMRNLSINLTSPDFEDHRKLLSSYEVEQETDSYMNAERPVSDEQLKSVI 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0945 322 ProSiteProfiles SANT domain profile. 62 113 IPR017884 -
Lal2g0945 322 SMART sant 63 111 IPR001005 -
Lal2g0945 322 SUPERFAMILY Homeodomain-like 58 114 IPR009057 -
Lal2g0945 322 PANTHER PROTEIN REVEILLE 6 15 313 - -
Lal2g0945 322 MobiDBLite consensus disorder prediction 114 137 - -
Lal2g0945 322 Pfam Myb-like DNA-binding domain 64 109 IPR001005 -
Lal2g0945 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 113 IPR017930 -
Lal2g0945 322 MobiDBLite consensus disorder prediction 1 21 - -
Lal2g0945 322 Gene3D - 66 114 - -
Lal2g0945 322 PANTHER SWI/SNF COMPLEX-RELATED 15 313 - -
Lal2g0945 322 CDD SANT 66 109 IPR001005 -
Lal2g0945 322 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 62 111 IPR006447 GO:0003677
Lal2g0945 322 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0945 Lal-Chr2 6342212 6347533 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal2g0945 Myb_DNA-binding 1.9e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0945 - - gmx:100783949 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0945 2 6342212 6347533 Lal2g0945 2 6342212 6347533 ECH