Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0941 ATGACTGTTGGAATCTCTGCCACTATAGCCATGAAGCCTCTTCTCCGTCTCCACCACCCCTTTTTCCATCTCCACACTAAGCTAACACCAACCATCTTCTTCAACCCCTTAAGACCTTTTACTCAAACAATAACCCCTTTGGCCCTTAGAATGAGAAATTTCAAGGTTTGTGTGGTCATGGGGGATCAAAAACAAAGCAGCCCAATTGAAACTGAAGAAGAAGAAGATAATAATAGTATTAGTAATAAGACCCCACAACCACAAGTAGATGTGAATTATGGTCAACTTATACCACCACATGTGGCTGAGAAATTGGCTAGAAAGAAGTCTGAAAGGTTCACATATTTGGTTGCTGCAGTCATGTCTAGCTTAGGCATCACATCCTTGGCAGTGCTTGCTGTTTATTATAGATTTTCATGGCAAATGGAGGGTGGAGAAATCCCTTGGTCTGAAATGTTTGGTACATTTGCTCTAGCAGTGGGTGCTGCTGTAGGTATGGAGTATTGGGCTAGGTGGGCTCATAGAGCTCTCTGGCATGATTCCTTATGGCACATGCATGAGTCCCATCATCGACCAAGAGAAGGACCCTTCGAGATGAACGATGTTTTTGCAATAATCAATGCTGTCCCTGCCATCGCTCTCCTCTCCTACGGTTTATTCAATAAGGGATTGGTCCCAGGCCTTTGTTTTGGTGCAGGTCTTGGAATAACGGTGTTTGGGATGGCGTACATGTTTGTACACGATGGCTTAGTTCATAGGAGATTCTCTGTGGGTCCCATTGCTAATGTGCCCTACTTCAGAAGGGTAGCTGCTGCCCACAAAATTCACCACACAGACAAGTTCAATGGGGTGCCATATGGGCTGTTTTTGGGACCACAGGAACTTGAAGAGGTAGGAGGGGTAGAAGAGTTGGAGAAAGAGCTACTTAGGAGTATAAGATCGTATAATCGTTCATGA 957 0.4462 MTVGISATIAMKPLLRLHHPFFHLHTKLTPTIFFNPLRPFTQTITPLALRMRNFKVCVVMGDQKQSSPIETEEEEDNNSISNKTPQPQVDVNYGQLIPPHVAEKLARKKSERFTYLVAAVMSSLGITSLAVLAVYYRFSWQMEGGEIPWSEMFGTFALAVGAAVGMEYWARWAHRALWHDSLWHMHESHHRPREGPFEMNDVFAIINAVPAIALLSYGLFNKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHRRFSVGPIANVPYFRRVAAAHKIHHTDKFNGVPYGLFLGPQELEEVGGVEELEKELLRSIRSYNRS 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0941 318 MobiDBLite consensus disorder prediction 65 86 - -
Lal2g0941 318 Pfam Fatty acid hydroxylase 162 289 IPR006694 GO:0005506|GO:0008610|GO:0016491
Lal2g0941 318 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 4 314 IPR045019 GO:0016491
Lal2g0941 318 PANTHER BETA-CAROTENE HYDROXYLASE 4 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0941 Lal-Chr2 6322306 6325153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0941 1 232 Chloroplast and Mitochondria Gene Families AT4G25700 59.483 1.14e-91 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0941 K15746 - gmx:100785541 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0941 2 6322306 6325153 Lal2g0941 2 6322306 6325153 ECH
Lal2g0941 2 6322306 6325153 Lal9g0824 9 5990582 5993077 LSH
Lal2g0941 2 6322306 6325153 Lal12g0064 12 416888 418680 PCT
Lal12g0064 12 416888 418680 Lal2g0941 2 6322306 6325153 PCT