Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0936 ATGAAGACCCAAAAGCTTATTTTACCTTTCATTCTTCTCCTTTTCATTCCTTCTTTATCTCTTTACATTCCCATAGATAACTACCTTCTCAGCTGTGGATCACACACCAATGCTTCCCTCTTCAACAGGTTCTTCATTGGTGATTCCACTAACCAAGGTTCAATCTTTCTCTCTGCAGACAACTCCATTTCCCTCAAAAACCAAAACCCACCTCCAAATTTGCCAACTTTGTATCACACTGCTAGAGTTTTCACTAGCATGGGAAGCTACAGATTTATGATGAGGAAAAATGGCACCTACTTGGTTCGTTTTCATTTCTCACCTTTTAAATCTCAAGGTTTTGATCTAAAAGATGCAAACTTTAGTGTCTTGGGTGATAGGAAATTGATTCTGAGCAATTTTAAGCCAACTAATGGTACACTGCTTAAAGAGTTTATTTTGAAGATAGAATCTAATTTGCTTGAAATTGTGTTTAGACCTGTGGGAAATTCTGGTTTTGGATTTGTCAATGCTGTTGAGGTGTTTACTGCTCCTGAAGATTTAATTATAGACTATGGTGCTAGGTTGGTTGGTCCTTCTGGTGTTGAGGAGTATAAGAACCTTTCTTCCCAGGTTTTAGAAACTGTTCATAGGATTAATGTTGGAGGTCTGAAATTGACTCCTTTTAATGATACCCTTTGGAGGACTTGGATTCCTGATGAGGAATTTCTGGTGTTTAAGGATGCTGCTAAGCCTGCAGTGAGCACTCATACTCCAAATTACCAGAAGGGAGGTGCGACTCGAGAGATCGCACCCGATAATGTTTATATGACAGCTCAGGAGATGAATAAGGATCATTCTATTTTGGCTTCAAAATTCAACATGACCTGGAATTTTCCAGTGGCCCCTGGTGGTGTTCGACACCTGGTTCGGTTGCATTTCTGTGATATTGTTAGTCCTGCTCTTAATTTTCTCTACTTTGATGTGTATATCAATGGCTATTCTGCCTACAAGGGTCTTGATTTGTCATCCCTTACATTCCACACGCTTGGATCTCCAGTCTATGTGGATTTTGTTGCAGATTCTGATGATTCTGGTGTTATTCAAATAAGTATTGGCCCTTCTGATCTAAGCAGTTCTATGAGGATGAACGCCATACTGAATGGTGCAGAGATAATGAAGGTGGTCAATATTATGGATTTACATGTTGCACCTCGGAAGAAAAGGTTGACAATGTTGGTGTGTTCAGTTGTTGGAGGAACTGTAATTTTGTTTCTAGTTATAGTTGCTTTTCTAGTTGCAGTCAATTGTAGGAAGAAGAAACCGAAACTAAGGACGGTGGAAAGTGTAGGATGGACGCCTTTATGCATGTTTGGAGGGAGTTCACATAGTAGAATGTCTGAAGGGACAGGTTATCCATCTCCTGGATCTTATGGATATCTTTGCTTGAAAATCTCTTTTGCTGATATACAATCAGCAACAAACAATTTTGATAGAAGTTTGATTATAGGGTCTGGTGGGTTTGGTATGGTTTACAAAGGAGTACTCAGAGACAATGTGAAGGTTGCAGTCAAGAGAGGTATGCCTGGATCAAGACAAGGCCTTCCAGAGTTCCTGTCTGAAATAAGAATTTTGTCGAAAATTCGTCATTGCCATCTTGTTTCACTAGTTGGATATTGCGAAGAAAATTCAGAAATGATACTTGTCTATGAGTATGTGGAAAAAGGTCCACTTAAAAAGCATTTATATACTTCATCAGGACTTCCACCTTTATCATGGAAGCAACGTCTTGAGATATGCATCGGTGCAGCTAGAGGTCTCCACTATCTTCACACTGGTTTTGCTCAAGGAATCATCCACCGCGACATCAAATCAACCAATATTTTGCTTGATGAGAATTATGTGGCCAAGGTTGCTGATTTTGGCCTGTCAAGATCTGGGCCGTGTATCGATGAAACCCATGTGAGTACCGGTGTGAAAGGTAGTTTTGGTTATGTTGATCCAGAGTATTTCCGGAGGCAGCAACTTACAGATAAATCAGATGTTTATTCGTTTGGGGTTGTGCTTTTTGAGGTTCTTTGTGCCAGGCCTGCTGTTGACCCACACCTCGATAGGGAGCAGGTGAACTTAGCAGAATGGGCACTTGAGTGGCAGAAGAAGGGAATGCTGGAGCATATTGTTGATTCTCATCTAGTTGGACAGATCGAGGAAAAATCGTTGAAGAAATTTGGCGAAACAGCAGAAAAATGTTTGGCTGAATATGGTGTTGATAGGCCAACTATGGGTGATGTCTTGTGGAATTTGGAATATATACTTCAGCTCCAAGAAAGTGGACAACAAAGGGAAACTACAGTTATTCCTGGGAATCCTTCTCACAACATAAGTACAGAGAGAGATTATGATCATTGTTATTCAGACATAAACAGTAGTGAAGTTTTTTCCCAACTTATGACCAATGAAGGCAGATAG 2448 0.402 MKTQKLILPFILLLFIPSLSLYIPIDNYLLSCGSHTNASLFNRFFIGDSTNQGSIFLSADNSISLKNQNPPPNLPTLYHTARVFTSMGSYRFMMRKNGTYLVRFHFSPFKSQGFDLKDANFSVLGDRKLILSNFKPTNGTLLKEFILKIESNLLEIVFRPVGNSGFGFVNAVEVFTAPEDLIIDYGARLVGPSGVEEYKNLSSQVLETVHRINVGGLKLTPFNDTLWRTWIPDEEFLVFKDAAKPAVSTHTPNYQKGGATREIAPDNVYMTAQEMNKDHSILASKFNMTWNFPVAPGGVRHLVRLHFCDIVSPALNFLYFDVYINGYSAYKGLDLSSLTFHTLGSPVYVDFVADSDDSGVIQISIGPSDLSSSMRMNAILNGAEIMKVVNIMDLHVAPRKKRLTMLVCSVVGGTVILFLVIVAFLVAVNCRKKKPKLRTVESVGWTPLCMFGGSSHSRMSEGTGYPSPGSYGYLCLKISFADIQSATNNFDRSLIIGSGGFGMVYKGVLRDNVKVAVKRGMPGSRQGLPEFLSEIRILSKIRHCHLVSLVGYCEENSEMILVYEYVEKGPLKKHLYTSSGLPPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCIDETHVSTGVKGSFGYVDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPHLDREQVNLAEWALEWQKKGMLEHIVDSHLVGQIEEKSLKKFGETAEKCLAEYGVDRPTMGDVLWNLEYILQLQESGQQRETTVIPGNPSHNISTERDYDHCYSDINSSEVFSQLMTNEGR 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0936 815 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 16 783 - -
Lal2g0936 815 SUPERFAMILY Protein kinase-like (PK-like) 461 761 IPR011009 -
Lal2g0936 815 CDD STKc_IRAK 496 762 - -
Lal2g0936 815 Gene3D Transferase(Phosphotransferase) domain 1 566 782 - -
Lal2g0936 815 ProSitePatterns Protein kinases ATP-binding region signature. 496 518 IPR017441 GO:0005524
Lal2g0936 815 SMART serkin_6 490 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0936 815 Pfam Malectin-like domain 30 388 IPR024788 -
Lal2g0936 815 ProSiteProfiles Protein kinase domain profile. 490 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0936 815 Gene3D Phosphorylase Kinase; domain 1 468 565 - -
Lal2g0936 815 PANTHER OS07G0166700 PROTEIN 16 783 IPR045272 GO:0004714|GO:0006468
Lal2g0936 815 Pfam Protein tyrosine and serine/threonine kinase 495 758 IPR001245 GO:0004672|GO:0006468
Lal2g0936 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Lal2g0936 815 Gene3D - 205 390 - -
Lal2g0936 815 Gene3D - 27 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0936 Lal-Chr2 6297032 6299479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0936 10 815 Receptor kinase-like Gene Family AT5G59700 48.357 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lal2g0936 Malectin_like 5.5e-32 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0936 - - gmx:100814974 1327.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0936 2 6297032 6299479 Lal2g0936 2 6297032 6299479 ECH
Lal2g0936 2 6297032 6299479 Lal12g0062 12 408944 411409 PCT
Lal2g0936 2 6297032 6299479 Lal13g0054 13 349081 351552 PCT
Lal12g0062 12 408944 411409 Lal2g0936 2 6297032 6299479 PCT
Lal13g0054 13 349081 351552 Lal2g0936 2 6297032 6299479 PCT