Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0929 ATGCCAGTTGCAAAAGTCAAGGCCTCTGGCACTCTGGATGTCATGAAAACAGAAGACAAAATAGATAACATAATCAGACAAGAAGTTGGCATAGAACCCTACCTTTCCTTTCCAAGGGCTGATGACAGCCCTGTTCAGTGGATTCAATTACTTCATGCTTTAGATCAGCAAGAACTTCCAGGGTGGCCTTTGCTCTCTCCTTTTCCTATCAAGGTTCAGTTGCTAAAGTGTGAAAAATGCTCTCGAGAGTTTTGCTCCCCTATTAACTATAGAAGACATATACGTGTACACCACCGGTTGAAGAAACTTGCTAAGGATTCTACAAAAAATAGGGATCTTTTGGGAGCATATTGGGATAAGCTCTCTGTGGAAGAGGCAAAGGAAGTTGTATCATTCAATAATGTGATGCTGGAGGAAGTTCCAGGGTCTTCAATTTTAAGTGCTCTGACAGCTCTTGTTCAAAGGCAAGTGTTCTCTCCATTTCCACATTATTATCTGAGGGCTGGTGGTGCCCTTTTGGATATTGTTCAATCTAATCCATCCAGCTTTCCTATGTCTTCCCAAGAGTTGTTCAGTATTCTTGACGATGCAAGTGAAAAAACATGTTTATGTGGGACAGCAGTGTCAATGCAAAGATATGTCTTTGACGGAGAGGCTGGAAAAATTGGTCTCGAGCCTAAAAACCTAGTTGCTTGCACAAGTTTCTTGCTTGAGCAGAAACTGGTGAACGCATGGCTTGCCGACAAGGATGCTGAAGCATTGAGGTGTCAGAAGCAGCTGGTTGAGGAGGAAGAAGCTGCTCAGAAAAGACAAGCTGAGATTTTGGAGAGGAAACGCCAGAAAAAGCTTAGACAAAAAGAACACAGGGCAAAGGAACAAAGGCATGGGAATGAGGTAGAAATTAAAGAGGACACTGACAGCACAACAGAGGCTTTAGCACCAGCAGAAGCATCTTTGGATACACATGATTTTGAAGCTCATAATCCTGATACCTTTGTAGATAATGTTCCTTCACATGTACCTTCCGAATGCCCAGACACTAATGAAGGAATAGTTGGAGATCCTCAGCCAGGGTATGATTTAGGCACTGACCAGAATATTGAGCGACAGTCAGCCCATGGACATAATCATCAGTGCACAGCAGTTGCCAAACGGCAAGGCTCACTAAAACCACAACAGGCTGTAGGCAATGGTTTGCAGGAAAGCCAAAATCCTCCAATTTCAAAGCCTGACGTCATTCTCAAATATGGAACCAATCATGATCAAAGTGCAGCTGCTATATTTAATGGGAGTGAAGTATGGCGTCAAAAGCCTAAACAAGTTGACAGGGTGGTTTTGAAAGCTATGGTGGATAAAGAACCAGACCATGGTAATAATCATGAAGTTTTGATAGGATCTGTATCTGTTACTCTTGGAAATTGCAGCCAATCAGAGGGCAATGCAGTGACATCCCGAGAGGATGTTGTAGTTAAGAATCTGGCCAATCAGAACTGTTCTCAGGATAAGCCTATGAAACCTGATTTTGATCAGAGTGGCAACAGTCGGCTAACAACAGAGTTTTGGAAGCCAGTTAGCAGGCATGGCATTAAAGATCCATCAGCAGTTAATGGAAGTGGGCCAGAAGCTGATGCAGTTTATGGAAATGGAGATTGTCATAATTTGTCAGGTCCAAGTAGTTTAAGGCTGTGCAGTGTAGAAGGCAGAAGTGATATTGGTTCTGAAAACAATTCCCTCCATCTAGAGGGCACAGTGGAACTGGGAAAGTTACGTTTATCCAGCCATGCTGCAAGAGCTTTTCTTTCACAAAGATGGAAAGAAGCTATCTCTTCAGATCATGTGAAATTGGTTCTTTACCCCAATTCTGAACCTCCTGGGTGCCAGGAGACACAAGACTCTGAAGTCGCAACGGGCCAATATTCTGATGTGGACAAATCCAACATTCATGCAAATGCACAGAGCCGGTTGCCTGCAACCGTGGGAGTTACAAAGCCCAAAACAAAGCCTGAAAAGGGAACCAAGGCAAAGTATATTCCAAAACAAAAAACAACCACCTAA 2055 0.4326 MPVAKVKASGTLDVMKTEDKIDNIIRQEVGIEPYLSFPRADDSPVQWIQLLHALDQQELPGWPLLSPFPIKVQLLKCEKCSREFCSPINYRRHIRVHHRLKKLAKDSTKNRDLLGAYWDKLSVEEAKEVVSFNNVMLEEVPGSSILSALTALVQRQVFSPFPHYYLRAGGALLDIVQSNPSSFPMSSQELFSILDDASEKTCLCGTAVSMQRYVFDGEAGKIGLEPKNLVACTSFLLEQKLVNAWLADKDAEALRCQKQLVEEEEAAQKRQAEILERKRQKKLRQKEHRAKEQRHGNEVEIKEDTDSTTEALAPAEASLDTHDFEAHNPDTFVDNVPSHVPSECPDTNEGIVGDPQPGYDLGTDQNIERQSAHGHNHQCTAVAKRQGSLKPQQAVGNGLQESQNPPISKPDVILKYGTNHDQSAAAIFNGSEVWRQKPKQVDRVVLKAMVDKEPDHGNNHEVLIGSVSVTLGNCSQSEGNAVTSREDVVVKNLANQNCSQDKPMKPDFDQSGNSRLTTEFWKPVSRHGIKDPSAVNGSGPEADAVYGNGDCHNLSGPSSLRLCSVEGRSDIGSENNSLHLEGTVELGKLRLSSHAARAFLSQRWKEAISSDHVKLVLYPNSEPPGCQETQDSEVATGQYSDVDKSNIHANAQSRLPATVGVTKPKTKPEKGTKAKYIPKQKTTT 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0929 684 MobiDBLite consensus disorder prediction 290 309 - -
Lal2g0929 684 ProSiteProfiles Zinc finger C2H2 type domain profile. 75 102 IPR013087 -
Lal2g0929 684 ProSitePatterns Zinc finger C2H2 type domain signature. 77 98 IPR013087 -
Lal2g0929 684 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 683 - -
Lal2g0929 684 MobiDBLite consensus disorder prediction 647 684 - -
Lal2g0929 684 MobiDBLite consensus disorder prediction 278 311 - -
Lal2g0929 684 SMART c2h2final6 75 97 IPR013087 -
Lal2g0929 684 Coils Coil 251 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0929 Lal-Chr2 6245401 6252411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0929 19 681 C2H2 Transcription Factor Family AT4G25610 41.568 2.08e-141 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal2g0929 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0929 - - gmx:100809067 866.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0929 2 6245401 6252411 Lal2g0929 2 6245401 6252411 ECH
Lal2g0929 2 6245401 6252411 Lal9g0816 9 5901138 5908366 LSH
Lal2g0929 2 6245401 6252411 Lal12g0055 12 371205 378563 PCT
Lal2g0929 2 6245401 6252411 Lal13g0047 13 311230 318980 PCT
Lal12g0055 12 371205 378563 Lal2g0929 2 6245401 6252411 PCT
Lal13g0047 13 311230 318980 Lal2g0929 2 6245401 6252411 PCT