Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0920 ATGGAAACCCCTACAACACTCACCGCCCTCCTCCGCACCGTCGCCGATAGATTCCCTTCCCGCCGATCCATCTCACTTGCCGGAAAGTTCGACCTCACCCACTCCCACCTCCATGAACTCGTCGACCTTGCCGCCGCTCGCCTTCTCTCCACCGGAATCAAGCCTGGCGACGTCATCGCCCTCACTTTCCCCAACACTGTCGAGTTTGTTATAATGTTTTTAGCTGTTATTCGAACTAGAGCTACGGCAGCACCACTTAACGCGGCTTACACGGCGGAAGAGTTCGAATTTTATCTATCTGATTCGGAATCGAAGCTTCTAGTAACATCAGAAGAAGGAAATAAACCGGCTCAAACTGCGGCTTCCAAACTCAACATTCAACACGTTACAGCTTCCTTCACTGAATCGGAACTGAAACTGAACCTCTCACTGAACCAGACCGAGTCAGATCCTATTCCCAACTCGGTCTCCCAACTCACTAACGAACCATTTGACGTGGCACTTTTTCTCCACACCTCCGGAACCACAAGCCGTCCCAAGGGAGTACCTTTGACTCAGCACAATCTAGCTTCATCGGTTCGAAATATCGAATCGGTTTACCGACTCACTGAGTCTGACTCCACGGTTATCGTGCTCCCACTTTTCCACGTCCACGGGTTGATTGCCGGATTATTGAGTTCACTCGGCGCCGGCGCAGCGGTGACGTTGCCTGCATCGGGAAGATTCTCCGCTTCAACGTTTTGGAAAGATATGGTAAATTACAACGCTACATGGTATACAGCGGTTCCTACAATACACCAAATCATACTGGACCGGCACCAGAGTAATCCCGAACCGATTTACCCAAAACTCCGGTTTATTAGGAGCTGCAGCGCGTCGTTGGCACCGACGATTCTGCGTCGGTTGGAGGAGACGTTCGGGGCGCCGGTATTGGAGGCTTATGCGATGACGGAGGCGTCACATCTTATGTGTTCGAATCCGTTACCGGAGGATGGGCCCCACAAGGCCGGGTCAGTAGGGAAGCCCGTGGGCCAGGAGATGGTGACATTAGATGAAACGGGTCGGGTTTTGGAGGAAGGAGTGAATGGAGAGGTTTGTATTAAGGGAGAGAATGTAACGAAAGGGTATAAGAATAATCCGGAGGCTAATACGACGGCGTTTCAGTTTGGATGGTTTCATACAGGTGATCTTGGATATTTTGATTCAGATGGCTACTTGCATCTCGTGGGTCGGATCAAGGAGCTAATAAACCGTGGAGGAGAAAAAATATCACCAATAGAAGTGGATGCTGTTCTTCTATCTCATCCAGATGTTGCTCAGGCAGTGGCATTTGGAGTGCCAGATGCCAAGTATGGTGAAGAGATAAACTGTGCAATCATTCCAAGAGAGGGATCAAACATTGATGAGGAAGAGGTGTTAAGATTTAGCAAGAAGAATCTTGCATCTTTCAAAGTCCCCAAAAAGATTTACATCACTGATTCTTTGCCTAAGACCGCCACGGGGAAGATTTTAAGGCGCCTTGTGGCAGAGCACTACGTCTCTCAAAATTGA 1551 0.4945 METPTTLTALLRTVADRFPSRRSISLAGKFDLTHSHLHELVDLAAARLLSTGIKPGDVIALTFPNTVEFVIMFLAVIRTRATAAPLNAAYTAEEFEFYLSDSESKLLVTSEEGNKPAQTAASKLNIQHVTASFTESELKLNLSLNQTESDPIPNSVSQLTNEPFDVALFLHTSGTTSRPKGVPLTQHNLASSVRNIESVYRLTESDSTVIVLPLFHVHGLIAGLLSSLGAGAAVTLPASGRFSASTFWKDMVNYNATWYTAVPTIHQIILDRHQSNPEPIYPKLRFIRSCSASLAPTILRRLEETFGAPVLEAYAMTEASHLMCSNPLPEDGPHKAGSVGKPVGQEMVTLDETGRVLEEGVNGEVCIKGENVTKGYKNNPEANTTAFQFGWFHTGDLGYFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDVAQAVAFGVPDAKYGEEINCAIIPREGSNIDEEEVLRFSKKNLASFKVPKKIYITDSLPKTATGKILRRLVAEHYVSQN 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0920 516 Pfam AMP-binding enzyme C-terminal domain 427 502 IPR025110 -
Lal2g0920 516 CDD FACL_fum10p_like 19 510 IPR045310 GO:0016874
Lal2g0920 516 ProSitePatterns Putative AMP-binding domain signature. 169 180 IPR020845 -
Lal2g0920 516 PANTHER ACYL-COA SYNTHETASE 1 515 - -
Lal2g0920 516 Gene3D - 412 514 IPR045851 -
Lal2g0920 516 Gene3D - 5 411 IPR042099 -
Lal2g0920 516 PANTHER OXALATE--COA LIGASE-LIKE 1 515 - -
Lal2g0920 516 Pfam AMP-binding enzyme 13 418 IPR000873 -
Lal2g0920 516 SUPERFAMILY Acetyl-CoA synthetase-like 4 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0920 Lal-Chr2 6150275 6159119 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0920 25 506 Monolignol Biosynthesis Gene Families AT4G19010 29.659 6.43e-57 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0920 K22133 - gmx:100779306 821.617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0920 2 6150275 6159119 Lal2g0920 2 6150275 6159119 ECH
Lal2g0920 2 6150275 6159119 Lal9g0811 9 5850397 5856834 LSH