Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0911 ATGGTTCAACCAAACCATTTCTCCTACACTCACTTCACATGCCTTCTAAACCTTATTTTCTTCCCTCCCCTTCTCCTTTTACATGTAGCTGATGCACAAATATCAGCTGAACCAGTTCCCACATACATCTCCCACCACACTTGGCAACCTTCTTTTGCAATCACAACTGGAGCAATCATCTTTGCCCTTCTCATATTGGGATTGATCTCAATCTACATCAGAAACTGTACAAACTCACGATACAACCCTCGAACCAATAATACACTTGTTGGCACCACCAACACATCACAAAGGCCATGTTCTTGTTCACAAGGCATCAACAATGAACTCCTCAACACCTTTCCAATACTCTTCTACTCCACCATCAAGGATCTCAAGATGGGAAAGGGATCACTAGAATGTGCTGTTTGCTTGAGTGATTTCAAAGACTATGACACCCTCAGGTTGCTTCCAAAATGTAACCATGTGTTCCACCCTTCATGTATAGACTCATGGCTATGCTCCCAAGTTACATGCCCCGTTTGTCGTGCCAATTTGAACCAAGATTCATGTGAAGTTTCAATAACGGTGGAGACCCATTTGAGTAATCCTCAAAGGGTGCCAGAAAGTACAGGTTTTATAGCAGATCATTTTGGTGGTGAAGAGAACAACAACAACAACAACAACAACAACAACAACAACAACCCAATAGAGCAAAACGCAAACCAAGTTGCTAGTAACTTGAAGGAAAGTGAGGGTAACAATGATTTGGGTTCAATAAAGTTGAAGCATTTGAGGTCAAATTCAACTGGTCATTCAGTTTTGGAATCAGGTAAGAGTGTGGAAAGGTACACGCTTACGTTGCCTGAGGATGTGAGGAAGTACATTCTTGTGAACCATAACTACCATGGAAGAAGGGTTCAGCGTTCAGCTAGCTACAACAACCTTGTTATGATGCCAATGTTGGAGAGTCCTAGGAAATGTTGGAGTGACATTGAAGGGAATAATAAACTAAGGGTGTTGTTGACGCCGCAATTTGTTGCAAGCCGTGAAGAGGAAAAGTTTGTTCACATGGAGATTGGTGATGTTTCGGTTTGGTACAATAAATGGGATTTGGTGTGA 1101 0.4196 MVQPNHFSYTHFTCLLNLIFFPPLLLLHVADAQISAEPVPTYISHHTWQPSFAITTGAIIFALLILGLISIYIRNCTNSRYNPRTNNTLVGTTNTSQRPCSCSQGINNELLNTFPILFYSTIKDLKMGKGSLECAVCLSDFKDYDTLRLLPKCNHVFHPSCIDSWLCSQVTCPVCRANLNQDSCEVSITVETHLSNPQRVPESTGFIADHFGGEENNNNNNNNNNNNNPIEQNANQVASNLKESEGNNDLGSIKLKHLRSNSTGHSVLESGKSVERYTLTLPEDVRKYILVNHNYHGRRVQRSASYNNLVMMPMLESPRKCWSDIEGNNKLRVLLTPQFVASREEEKFVHMEIGDVSVWYNKWDLV 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0911 366 CDD RING-H2_EL5_like 133 176 - -
Lal2g0911 366 Pfam Ring finger domain 133 176 IPR001841 -
Lal2g0911 366 PANTHER RING FINGER DOMAIN-CONTAINING 6 222 - -
Lal2g0911 366 PANTHER RING FINGER DOMAIN-CONTAINING 230 315 - -
Lal2g0911 366 SUPERFAMILY RING/U-box 133 182 - -
Lal2g0911 366 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 117 183 IPR013083 -
Lal2g0911 366 MobiDBLite consensus disorder prediction 210 232 - -
Lal2g0911 366 ProSiteProfiles Zinc finger RING-type profile. 134 176 IPR001841 -
Lal2g0911 366 MobiDBLite consensus disorder prediction 213 232 - -
Lal2g0911 366 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 6 222 - -
Lal2g0911 366 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 230 315 - -
Lal2g0911 366 SMART ring_2 134 175 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0911 Lal-Chr2 6085721 6086906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0911 9 320 Rapid Response to Elicitors AT3G05200 34.268 4.36e-51 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0911 K10664 - gmx:100782532 270.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0911 2 6085721 6086906 Lal9g0800 9 5771410 5772390 LSH