Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0905 TTCTTTATTGATTGTGAAATTGATTTGGCCATGTTATTATTATTCATCCTTGTTGTTGCTAATGGGACTATTATGCATGAAAGGAAAATGGAGGGAAGTAGTGACTTGAGTCTTCTTGGTGAGAATTTTGAGACGGGAAGGAGGAGGGATGATGACTATGAAAGTCGGTCTGGAAGTGACAATTTTGATGTTGCATCCGGTGATGATCTAGATGTCAACGAGGAGACCCCTCGAAATCGGAGGAGGAAGAAGTATCACAGGCACACTCCATCACAAATACAGGAGCTTGAAACTTTCTTCAAGGAGTGCCCACACCCCGATGAAAAGCAAAGGAATGATCTTAGCAACAGGCTTAGCTTGTCTAACAAGCAAGTGAAGTTCTGGTTTCAGAACCGTCGTACACAAATGAAGAATCAACTAGAGCGCCATGAGAACATGATGCTTAGGCAAGAGAATGAGAAGCTTCGAGCTGAGAACGGTTTGATGAAAGAAGCAATGGCGAACCCATTGTGTCAAACTTGTGGTGGCACAGCGCTCCCTGGCCAAATTTTATTTGATGAGCACCAAGTAAGGATTGATAATGCTAGATTGAAAGATGAATTGACCCGAATATGTAGCTTAGCAAACAAGTTTGTTGGTAGAGCTTTATCACCTTTGGTTGGTCCCATGGGTCTTCAGTCCCCGAATTCCAATCTAGACCTTGCCATTGGAATGAATAATGGATTTGTTGGTCCAAGCAATCATGGCATGATGCCATTGCCAACGGGGCTCGATTTCGGAGAACGGCTTATGGAAACTCCTCAACCTGCCATGCCTGGGATTGTTAGACCACCAGTGGGATTGATGGGAAATCAAATCCAAAACGAGAGAGCAATGCTTATAGAACTTGCCATGGTTGCAATGGAAGAGCTTATTAAGATGGCTCAGCCAGATACCCCTCTTTGGGTTAATAGTTCAGATGGTAGGAATGAAATGCTGAGTCAGGAGGAGTATGAAAGGATTTTAGTTCCTCCTTGTCTTGGTCCAAAACCCAATGGCTATGTGACTGATGCTAGCAGAGGATCTGGTTTAGTGATAGGCAATTGTCTGGGCCTTGTGGAAATGTTGATGAATGTGGATCAATGGTCAGAGATCTTTCCCTCTGCAATTGCTAGAGCTGTCACCCTGGAAATAATATCCACAGGCATACCTGGCAACAAAAATGGAGCTATGCAAGTTATACATGTTGAGGTTCAATTGCCTTCGCCACTTGTCCCGGTTCGTGAATTGACCTTCCTTAGGTATTGTAAGCAGCATACGGAAAGTTTATGGGCAGTGGTCGATGTTTCAGTTGAAATTGGTCATAATCCTACCAATGCTCCATACCCAATCATGAACTGTCGGAGGATGCCTTCTGGCTGCATTGTACAAGACACATCCAATGGCTTTTCCAAGGCAAGTAAATGTTCAGTAACTTGGATTGAGCATAACCAATATGATGAAACTATGATTCATCATCTCTATCGTCCATTGATTAGTTCCGGAATTGGGTTCGGTGCTCAAAGATGGATTGCCTCTCTCCAGAGACAATATGAATGCTTATCAACTCTCTTGTCCCCTCCCATCCCAACTGAGGACCCCATAGACGTGAGCCAAGAAGGTAGGAGAGGCATGGTGAAGCTTGCGCAACGCATAACCAACAGCTTTTTCACCGGTGTTTGTGCCTCGGCTAAGCACCAGTGGGAGTCCCTTCGGTTTGAAGCTCTGGATGATAACATGAAAGTGATGGCCCGCAAAAATGTCGCTGGTGAGCCTAATGGCGTTGTGCTGAGTGCTGCAACCTCAGTCTGGATGCCAGTGTCGCAACAGAGGCTATTCGATTTCCTCCGCGATGAGCGATTGAGAGGGGAGTGGGATGTCTTGGCCAACAATGGACCAATGCAACAGTTGTTTCGTATTTCAAAGGGACAAGGAAATGGAAATTGTGTCTCTGTCCTTCACAGTGGTGGTAATGGTTCGGAGAGCAGCATGTTGGTTCTCCAAGATTCATGGACTGATATATCTTCTTCTGTGGTGGTTTACGTGGCGGTGGACGTGGATTCCATGAATTTAGTAATGAATGGAGGAGAATCTGCATATTTACCTCTCTTACCTTCAGGCTTTATTATTCATCCAGATGGCAATGGTGGTGGCGATAGTGGTGGAAGCTTGCTTACGGTTGGGCTGCAAATTTTGCTCAGTACCCTCCCAAATGGTAATAAGCTATCATTAGAGTCTGTTGTTTCTGTCAGTAACCTCATCACAGAGAGCATTCAGAAGATCAAGCTTTCACTTAGAGTTGCATGA 2325 0.4482 FFIDCEIDLAMLLLFILVVANGTIMHERKMEGSSDLSLLGENFETGRRRDDDYESRSGSDNFDVASGDDLDVNEETPRNRRRKKYHRHTPSQIQELETFFKECPHPDEKQRNDLSNRLSLSNKQVKFWFQNRRTQMKNQLERHENMMLRQENEKLRAENGLMKEAMANPLCQTCGGTALPGQILFDEHQVRIDNARLKDELTRICSLANKFVGRALSPLVGPMGLQSPNSNLDLAIGMNNGFVGPSNHGMMPLPTGLDFGERLMETPQPAMPGIVRPPVGLMGNQIQNERAMLIELAMVAMEELIKMAQPDTPLWVNSSDGRNEMLSQEEYERILVPPCLGPKPNGYVTDASRGSGLVIGNCLGLVEMLMNVDQWSEIFPSAIARAVTLEIISTGIPGNKNGAMQVIHVEVQLPSPLVPVRELTFLRYCKQHTESLWAVVDVSVEIGHNPTNAPYPIMNCRRMPSGCIVQDTSNGFSKASKCSVTWIEHNQYDETMIHHLYRPLISSGIGFGAQRWIASLQRQYECLSTLLSPPIPTEDPIDVSQEGRRGMVKLAQRITNSFFTGVCASAKHQWESLRFEALDDNMKVMARKNVAGEPNGVVLSAATSVWMPVSQQRLFDFLRDERLRGEWDVLANNGPMQQLFRISKGQGNGNCVSVLHSGGNGSESSMLVLQDSWTDISSSVVVYVAVDVDSMNLVMNGGESAYLPLLPSGFIIHPDGNGGGDSGGSLLTVGLQILLSTLPNGNKLSLESVVSVSNLITESIQKIKLSLRVA 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0905 774 ProSiteProfiles START domain profile. 286 529 IPR002913 GO:0008289
Lal2g0905 774 Pfam START domain 297 525 IPR002913 GO:0008289
Lal2g0905 774 CDD homeodomain 82 139 IPR001356 GO:0003677
Lal2g0905 774 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 44 772 - -
Lal2g0905 774 CDD START_ArGLABRA2_like 290 525 - -
Lal2g0905 774 Gene3D - 70 156 - -
Lal2g0905 774 ProSitePatterns 'Homeobox' domain signature. 114 137 IPR017970 GO:0000981|GO:0006355
Lal2g0905 774 Gene3D - 294 511 IPR023393 -
Lal2g0905 774 SUPERFAMILY Homeodomain-like 71 139 IPR009057 -
Lal2g0905 774 ProSiteProfiles 'Homeobox' domain profile. 79 139 IPR001356 GO:0003677
Lal2g0905 774 Pfam Homeodomain 82 138 IPR001356 GO:0003677
Lal2g0905 774 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 44 772 IPR042160 -
Lal2g0905 774 SMART START_1 295 526 IPR002913 GO:0008289
Lal2g0905 774 SMART HOX_1 81 143 IPR001356 GO:0003677
Lal2g0905 774 MobiDBLite consensus disorder prediction 48 90 - -
Lal2g0905 774 SUPERFAMILY Bet v1-like 290 526 - -
Lal2g0905 774 Coils Coil 133 168 - -
Lal2g0905 774 SUPERFAMILY Bet v1-like 556 739 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0905 Lal-Chr2 6027793 6031283 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0905 31 771 Homeobox Transcription Factor Family AT3G61150 48.501 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lal2g0905 START 1.3e-42 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0905 K09338 - gmx:100794400 930.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0811 1 5578861 5582099 Lal2g0905 2 6027793 6031283 ECH
Lal2g0905 2 6027793 6031283 Lal2g0905 2 6027793 6031283 ECH