Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0903 ATGGGCTTTCTCCACCGTCTCTTCAGCCGAAAGAAGCACCCACCGGGTGCTGATGCCAACATATCTAGACCCAAATCCAACAAAGACAATAAGAAGAAAAACACCACCAAGGACAAGAACAAGGACAACTACAACAACTCCTTTGACCGTTCCACTTTCTCTTTCGACGCTAACAGACATGCCATCGCCGTAGCCGCTGCCACCGCCGCAGCAGCCGAGGCTGCTCTTGCAGCCGCGCATGCAGCTTCTGAGGTTGTTAGACTGACTAACGGAAGCGACGCTGGAGCTAGCAGCAGGGCAGCATCGGTGTCCCATGTCCAGCGGCGGTTGGTGGAGGAAACTGCCGCCGTGAAAATACAATCAGCATTCCGTGGTTACTTGGTATGTGAAACAGTTGATATTCTATATGTTGTCCTTGAAATTGTAGAACCATCTAAAGATGTTATAAGAATGAGACATGTGAATAATTTTGATGAGGAACCATTACTAAATGATATATTACAACTCACTGGTTTTTCAAAATTATCTAGTCTTCGATCTTTCAACATTGACCCAAGTTTAATTACTGCTCTTGTTGAAAGATGGAGACCAGAGACACACACTTTCCATCTACCACATGGTGAATGCACCATAACATTAGAAGATGTGTCACTCCAAATAGGAGTGAATGTGAATGGCCTACCATTAGCTGGGCCTACATATTTCGATTGGAATGAAATATGTGAGGAACTATTGGGAAAAGTTCCGAGTGACGAACAAGACATGAGGGGATGCGAGTTAAAACTAACTTGGTTGTTTGATAACTTTGAAACACTACCCCCTCGCCCTACACAATTGCAAAAAGAGCAATTTTGTAGGGCACGAATCTTATACATGATAGGCGGTGAGTTGTTACCCGACAAATCAAATAATAGGGTACATTTAATGTACTTACCTTTACTAAGAGATCTAACAAGAGTTCACCGATATAGTTGGGGTTCGGCTTGTTTAGCAAACTTGTATAGGGAAATGTGTCGGGCAACAAAGCCTAATGCAAAAGCCATGGGTGGGTGTTTAACACTTCTACAGTCCTGGGCATGGTATCGCCTACCCTTTTTGGCACCGATAGTTAATCGTCTACCCACGTATCCATTTGCTTCAAGGTGGGGTCAAAAAAATCTAAGCTACCGAGGAATTCCACGTGGAGACTTGACTGCATATAGGTCACGCTTGGATCGTATGGATCTCAACGATTTTCAATGGCTTCCATATGAGAATTATGTCGACAATCTACCACGTGAAGTTCTAGAAGATAAGAATATTTGGAGTGCTTGCACAGCATTGATTTGTTTCTCCATTGTCGAATGGCATCAGACAGATCGAGTAAGACTACAGTTTAAATTACTCCAAGATTTGCCACAACCACCGCATAATCTAGATGCCCTACACAGAGTTGACAAACGGGGTAATCTAGATACAAACTGGGCAACTAGACATGCGGAGTGGATTGACTATTGGAGTAATCGGAGGGATCAAGTCCAACAAGGTCCTGAAATCCAATATCCAATTCACACACAACAATATATAATGTGGTATAGAAGAAATACTAGATTATTCTTATCTTCAGAAGCACAATTAAGAGACCCCCGACAAATAAATTATCAACAAAATCAACCTCCCACATACCAACAACCCACATACCAACAACCAACATACCAACAGCCCATATACCAACAAAGTCAACCACCCATATACAATACAAATCAACAACAACCATACTATACAAATCTACCTCCCATACCTCCAACATCAATGTTCCAACCTACTATGAACCCGCCTATTATGTCACAAAATCTTTGGTATCAACCAACAATGTCTGCCTCGTTTAACATTCAACCAGGAAGAATGTCTTTTCACGAACCGTCACAACACCATCGTAGTGACGACATGATGCCTAGCCGCCACTCATTTTCTACCGATCATAATGACTTTATGAATAACTTACTCGGTACACCTGACTCGGCGAATCAACTTTTTAGTGATATAGGCTACAATCTCAATCAAGATGGTGCTGGTCCAAGTTCTTTTATGGTTGACACTAATATTTTTCCAACGGGACAGACAGATACAGTTCCAGACCAAACACCGACTGAAGTTCGAAGGACAAGACGTAATAGGCAACCACGTAGGGCCCAAACCGACTTTAGCAAAAAATATCCAACGGCTCAGGCAAGGAGGGCATTAAGAGCACTTAAAGCATTAGTGAAGTTGCAAGCATTGGTGAGGGGTCACATTATAAGAAAGCAAACTTCAGATATGCTTAGGCGCATGCAAACATTGGTGCGACTGCAGACCCGTGCACGTGCAAGTCGTGTGCACTTGTCAAATACTATACATTCCTACAAGTCCTCACATTCTCATTACCCTGTCCATGAAGAAGATTATGAACATTCACTTCGTGCCTGTAGTACGAAATTCGATGGATCTATCCTCAAGAGATGTAGTTCAAATGCAAATTTCAGAGACACTGAATTGGAGAGGACCCGGTTCGGTTCTAATTGGTTAGACAGTTGGGTGGAAGAACGTGAGTGGAACCAAACCAGAGATCATGCATTGAAAAATATGCATCAAGATGATGAGAAGAGTGACAAGATTCTTGAAGTAGATACTTGGAAGCCACACTTGAACTCTCACCATGGTAGCAGCAGCTCTTTTCAGATATTACATCATTACATAGCTTCTGAATACAATAATGAGAATATTATGGCTTATGCCTCTCCATCGAAAAGTTTTTCGAAGGCTCTAAATCCAAGCCTCTCATCTAGAAAAGAAATGGATTCAAGAATTTCTGAGAATAGTCCACAATCATTTTCTGCCTCATCTAGGCTTGGAAGTGGTGCAAGGACAGGTCCTTTTACACCAACTAAGAGCGAGTGTTCGTGGGGTTTCGCAAGTGGCTACTCGAGTCACCCCAATTACATGGCAAATACTAAATCTTCTAGAGCTAAGGTAAGGTCACAAAGTGCCCCAAGGCAAAGGCTAGAGTTTGATAGATATGGTTCAAGTACAAGTTGTTTTGTTCAGGGTCATTGGGATCATGCAGGGCCTAATTCAGATAGAGATTCGATTTCAGGAGCAAGTCCTATTCAACATCAAGCCCCTTGA 3144 0.4246 MGFLHRLFSRKKHPPGADANISRPKSNKDNKKKNTTKDKNKDNYNNSFDRSTFSFDANRHAIAVAAATAAAAEAALAAAHAASEVVRLTNGSDAGASSRAASVSHVQRRLVEETAAVKIQSAFRGYLVCETVDILYVVLEIVEPSKDVIRMRHVNNFDEEPLLNDILQLTGFSKLSSLRSFNIDPSLITALVERWRPETHTFHLPHGECTITLEDVSLQIGVNVNGLPLAGPTYFDWNEICEELLGKVPSDEQDMRGCELKLTWLFDNFETLPPRPTQLQKEQFCRARILYMIGGELLPDKSNNRVHLMYLPLLRDLTRVHRYSWGSACLANLYREMCRATKPNAKAMGGCLTLLQSWAWYRLPFLAPIVNRLPTYPFASRWGQKNLSYRGIPRGDLTAYRSRLDRMDLNDFQWLPYENYVDNLPREVLEDKNIWSACTALICFSIVEWHQTDRVRLQFKLLQDLPQPPHNLDALHRVDKRGNLDTNWATRHAEWIDYWSNRRDQVQQGPEIQYPIHTQQYIMWYRRNTRLFLSSEAQLRDPRQINYQQNQPPTYQQPTYQQPTYQQPIYQQSQPPIYNTNQQQPYYTNLPPIPPTSMFQPTMNPPIMSQNLWYQPTMSASFNIQPGRMSFHEPSQHHRSDDMMPSRHSFSTDHNDFMNNLLGTPDSANQLFSDIGYNLNQDGAGPSSFMVDTNIFPTGQTDTVPDQTPTEVRRTRRNRQPRRAQTDFSKKYPTAQARRALRALKALVKLQALVRGHIIRKQTSDMLRRMQTLVRLQTRARASRVHLSNTIHSYKSSHSHYPVHEEDYEHSLRACSTKFDGSILKRCSSNANFRDTELERTRFGSNWLDSWVEEREWNQTRDHALKNMHQDDEKSDKILEVDTWKPHLNSHHGSSSSFQILHHYIASEYNNENIMAYASPSKSFSKALNPSLSSRKEMDSRISENSPQSFSASSRLGSGARTGPFTPTKSECSWGFASGYSSHPNYMANTKSSRAKVRSQSAPRQRLEFDRYGSSTSCFVQGHWDHAGPNSDRDSISGASPIQHQAP 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0903 1047 MobiDBLite consensus disorder prediction 709 726 - -
Lal2g0903 1047 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Lal2g0903 1047 MobiDBLite consensus disorder prediction 696 729 - -
Lal2g0903 1047 MobiDBLite consensus disorder prediction 1020 1047 - -
Lal2g0903 1047 Pfam Protein of unknown function (DUF4005) 932 1007 IPR025064 -
Lal2g0903 1047 MobiDBLite consensus disorder prediction 1 45 - -
Lal2g0903 1047 PANTHER IQ-DOMAIN 5-RELATED 1 127 - -
Lal2g0903 1047 PANTHER IQ-DOMAIN 5-RELATED 733 1035 - -
Lal2g0903 1047 MobiDBLite consensus disorder prediction 11 45 - -
Lal2g0903 1047 Pfam IQ calmodulin-binding motif 745 762 IPR000048 GO:0005515
Lal2g0903 1047 Pfam IQ calmodulin-binding motif 115 128 IPR000048 GO:0005515
Lal2g0903 1047 ProSiteProfiles IQ motif profile. 745 772 IPR000048 GO:0005515
Lal2g0903 1047 MobiDBLite consensus disorder prediction 943 964 - -
Lal2g0903 1047 SMART iq_5 111 133 IPR000048 GO:0005515
Lal2g0903 1047 SMART iq_5 742 764 IPR000048 GO:0005515
Lal2g0903 1047 MobiDBLite consensus disorder prediction 928 964 - -
Lal2g0903 1047 MobiDBLite consensus disorder prediction 1033 1047 - -
Lal2g0903 1047 Pfam Plant mobile domain 171 526 IPR019557 -
Lal2g0903 1047 PANTHER CALMODULIN-BINDING PROTEIN 733 1035 - -
Lal2g0903 1047 PANTHER CALMODULIN-BINDING PROTEIN 1 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0903 Lal-Chr2 6002308 6013151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0903 737 1024 IQD Protein Family AT5G62070 45.051 1.02e-39 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0903 - - gsj:114415843 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0903 2 6002308 6013151 Lal2g0903 2 6002308 6013151 ECH
Lal2g0903 2 6002308 6013151 Lal1g0810 1 5554104 5559812 LSH
Lal2g0903 2 6002308 6013151 Lal24g0036 24 241532 245748 PCT
Lal24g0036 24 241532 245748 Lal2g0903 2 6002308 6013151 PCT