Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0893 ATGACTTTTGACAAAGTCAATTTCACTGTTCTTGTTGTAGATGACAATGACACTTCTCTTACCATTGTTGCTAATATGCTCAGTTCATGGAATTACAAAGTTCTCACTGCCAACAGCTCCGATAATGCTTTGAAGACTCTTCGTGAATTTGAAGGTTTTCTAGATCTAGTTATTACAAGAGTACATATGTCAGGAATGAATGGATATGAGTTTCAACAACGTGTTAAAGAGGAATTCCATATACCTGTAATAATGATGTCTAGAGATAGCAGGAAGAAAGAAGTGATGACAAAGTCTGAAGAAAACGAAGCAACACATTGTCTTTTGAAACCCATTTGTGCTGATGACTTAAAAGACATAAGAAAGTGTGTTTTGGCTGCAAGAAAAGGGAAAGTAGTGATTGAAAATGAATCAAGAAATAGTGAAGGAGAGTCATCAGGAGCTGAGAAAAGTAGCATTGAATATGTTAAGCCTTGTGAACTATCGACAGTGACTCATGGGACCAAGAAGAAAAAGAGGTATACCAAGACAAGGAGTAGTGGAATGTATAATGAAAACCAAAGTGCAGAAAACCGTAGGGTTCAGAAGAAACCAAAGATAGTTTGGACAACACAACTTCACAATCTGTTTATGATGGCCATAAAACAACTTGGATATGATAAGGCTGTACCAAAGAAGATTCTTGAGGTCATGAATGTACCATACTTGACAAGAGGAAATATTGCCAGTCACTTACAGAAGTATCGCATTTTCCTGAGAAACATTGCAGAGAGAGGACTAGTTGAAGGTTTATCTGGCAAGATCCTAAAGTCAAATTTTGCTTCTGGGTTAACATTATCTGTGATCAAAGACATCCAAACAAGAAGTGAGAAACTACGTGTTCCCGTGCAGCAATATCTTCAAAATATGGCTCATCAAACAGAAAATAGAAGCACGTCCAAGGCTTCTACACCTTTCAACCAAGGTCAAATAAGTCCCCTTAATCTACCAGTTCAAAGAAATGCCTATGTTACTACAGAACTTGGAAGAGACCAATTTGCTTATCCAATGTACAAAGGCATGATCCATCAAAATCAGCAAGCTTTTAATGGTTATAATTCCTCGAATCCAGGTATACTTGGACAATCAAGCTTTGGAAACAATATCATTAATATTGGTGCCAATGAAATGCAGCAAAAAATGTTGGGAAGCAATGCAAACCCACTTTACAATTCTGGTCCTAGTAATTTCGCATCATTTGGAATAGGACATGGCTTGATGACTTCAACTAGTGGCCTTACAAGAAGTTTATCCCAAAATTATGGTTCATCATTTGGAAATGGGAACTTGGCATCTTTGAGCAACTCTAATGTTCCTTGGAACAAGTCCAGTTGTTATCCTGCTAGAAACAACTCATATGGAATTCAACTAAATGCTGGATCAGAAATGGTCGGGACTGGGGTCAAAGAAGGGTTTAATGTTGGTGCAAAGAACTATAGATCAGGCTTAGTCATGAATGAGACTAAAAGTGGAAATATGCATGTGGCTAGGGCACTGTCACCCTTGGGGAATAACAACATTAGCTTTGGATTGGTCAATGGAACTCAAAATGCAAATACGCATGTTTCACCCTTAGGGCATAACAATGGTAGCTTTGACTTGGTCAATGGTACTCAACATGCAAATGGTGTAGGAAATGAAGATCACTATAATGACAGTTCAATCACTGAAGGTGATGTCAGCAGACTGGAAGATGATATTTCTGAACTTTTCATGATGAAAGAAGAGACCGATGATGTCAGTGAATCTTTGAACTCTCACTTTTCTAGCTCCTCTACTGTTCTGCAGCCACCGGAGCAGAAAATACAGTACAGAAAAACTGATCATCCTACTGTACAAAGTATAAGGTTGAGGTTTAAAAGAGAAGAATGA 1911 0.3804 MTFDKVNFTVLVVDDNDTSLTIVANMLSSWNYKVLTANSSDNALKTLREFEGFLDLVITRVHMSGMNGYEFQQRVKEEFHIPVIMMSRDSRKKEVMTKSEENEATHCLLKPICADDLKDIRKCVLAARKGKVVIENESRNSEGESSGAEKSSIEYVKPCELSTVTHGTKKKKRYTKTRSSGMYNENQSAENRRVQKKPKIVWTTQLHNLFMMAIKQLGYDKAVPKKILEVMNVPYLTRGNIASHLQKYRIFLRNIAERGLVEGLSGKILKSNFASGLTLSVIKDIQTRSEKLRVPVQQYLQNMAHQTENRSTSKASTPFNQGQISPLNLPVQRNAYVTTELGRDQFAYPMYKGMIHQNQQAFNGYNSSNPGILGQSSFGNNIINIGANEMQQKMLGSNANPLYNSGPSNFASFGIGHGLMTSTSGLTRSLSQNYGSSFGNGNLASLSNSNVPWNKSSCYPARNNSYGIQLNAGSEMVGTGVKEGFNVGAKNYRSGLVMNETKSGNMHVARALSPLGNNNISFGLVNGTQNANTHVSPLGHNNGSFDLVNGTQHANGVGNEDHYNDSSITEGDVSRLEDDISELFMMKEETDDVSESLNSHFSSSSTVLQPPEQKIQYRKTDHPTVQSIRLRFKREE 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0893 636 Coils Coil 625 636 - -
Lal2g0893 636 ProSiteProfiles Response regulatory domain profile. 9 125 IPR001789 GO:0000160
Lal2g0893 636 Gene3D - 9 195 - -
Lal2g0893 636 SMART REC_2 8 121 IPR001789 GO:0000160
Lal2g0893 636 SUPERFAMILY Homeodomain-like 195 254 IPR009057 -
Lal2g0893 636 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 534 IPR045279 GO:0009736
Lal2g0893 636 PANTHER RESPONSE REGULATOR 23-RELATED 9 534 - -
Lal2g0893 636 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 197 250 IPR006447 GO:0003677
Lal2g0893 636 MobiDBLite consensus disorder prediction 164 191 - -
Lal2g0893 636 CDD REC_typeB_ARR-like 10 120 - -
Lal2g0893 636 SUPERFAMILY CheY-like 8 125 IPR011006 -
Lal2g0893 636 Pfam Response regulator receiver domain 10 119 IPR001789 GO:0000160
Lal2g0893 636 Gene3D - 196 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0893 Lal-Chr2 5887765 5893186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0893 5 382 Response Regulator Gene Family AT5G07210 31.221 3.42e-46 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal2g0893 Response_reg 8.2e-18 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0893 - K14491 lang:109352896 1016.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0893 2 5887765 5893186 Lal2g0893 2 5887765 5893186 ECH