Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0888 ATGGGTAAGGAGTGGTATTGGGCTAGTAAATCTTCCAAGAGAGTAGCTGAAGTTGAAACACAAACACAAACACAAACACAAACAGAAAACCCTTCTGGTTGCATGTGTGCTTTCTTTCAATTCTTTGATTTCCATCCATTTCACTTTACCACTATTAACAACCAGCAACAACAAACTACTTTCAACTCAGCATCTTATATCCAACAAGACCATAATGCTATCCCCAAAGGTGCCGAAGCACCTAGGAATAGCTTGGAATCAGAGGGTGGTACAATTTCATTTCCTTCAAAAGAAGAAATTTTTAAAATCCCAAAGAATATACAAATTAAAACAAGTAGAGACACTAAAACAACGACAAGTGGTGGAAATTTGAATGATTTATCCAACTCTCCAGGGATAAAGACACCAACTTTGGTTGCTAGATTAATGGGTTTAGATCTTCTTCCACACTCACCTTCTTCATCATCTTCATCATGCATACCCACTTCAAACCCACAATGCAATGTTCCAAATCTGCACCATTTGAGGCCAAAGCAACACATACAAACCAAACCAAGAAACAGCATAGATAGTGAAATTGGTGCTACTCGTTCTCTGCCTGAGACTCCTAGAATATCCTCTGCAAGAAGATCAGATGTTGAATATCATCATAGACTATCCCTACAAATCAACAAGGAGAACAACATTGTGCTTGGTGAGGATTTTGATCTCCCTAAATCTTCATTTTCTAAAAGGAGATATGATGAGAATAATAGTATAAGTCCAAGCCACTATGCTAGACAAATTGTGAAACAGGTTAAAGAAAGTGTTGCTAGGAAAGTTGGTCAAGACATTACCAACACTCTCAAAAGCAAAGAACAAACAAAGGAAGAAATTTTAGGCCAATTGAGAATAAAGAAATCTTCAAAAACAAGTGAACACTCAAACTCAAACCATTCATCTTATTCCCCGAGACTCAGATTCATGGATAGTACCAATAAGCACAAGCAGAGCACAACACCATTACCACTCATACCAAAAGATCAAAATCAAAGTACACAACAACCACAGCTTCCAAGAGTTTTAACAAAACCAAAGCCTCCTCAACCAGCACTATTGCCATATCAGCAAGAGTTGCAAAAGCAGAAAACAGTGCCAAAATGTAAGAATGTGAGCAATGAAATATTCAATTCAAAGATCAAAAGACCTCCACAAACAACAGATATAATCAGGAACAAGCAAGAAGACTCATTCATCACTATTCGTCCAACTTCACCAACTAGATTCAATGATATCAAACCCACCAAAAGCAAGAAAACTCGTTCATTGTCAAACACTATACTCGACAACATTAACTCTGTTCCAAATATTCTACCTATCAAGATAGACCCTTCTCCTCCAGCAACAAAAATTCCTCAGAAACAGTTATCTGATGGATGGAGCCACAAGTACAAACAAGAAGGGACGAACACACTCGCCACCCGAGAAAGTAGAAACAATGAAGAAGATAAACCAAATGGAACTGCTTCCACTATGGTAGCTCAAGAGCATAAACCAGAATTTCAGTACATCACAGGAATTCTAAATCGTACAATCACTACAACAAAACTAGTGTTCTTCAATCAGTGGTTCTCTCCAACTCATCCATTGGACCCATCAATCTTTCAACACCTTGAACAACACCACAATGATAAAGGTTTCAACTTCACCGCAAAACACCAACTGGGTCACCGTTGGAATCGGAAGTTACTGTTTGAATTGGTGGATGAAGTATTATTGGAGATTATAAGCCCAAGAAAACGTGAAAAGAAGCTTTGGTTTTTGCATGGTTGTTGTTGGTACGAAGGGAACGTTGAAGGGTTGGTAGAGAGTGTGTGGAAGAGGATAGAGAGGTTTCCATGCGCCAAGTGTGAGGTTTTGGAGGATATTGATGGGTTGATAAAATCAGAGGACATGGAGAAGGTGAAGGTGGAAAGTGAAGAGGGTTTGGAGGAAGAAGGAGAAAAGTTGGTGGCCGAGATTGAAGCAGATATATGGGACAAGTTAATGCATGAAACGATTATGGCAATGGATGGTCATGGAACGAGTTTCACAACAAGGTCAACAATTACACATAGGGCAAGTTAG 2106 0.3894 MGKEWYWASKSSKRVAEVETQTQTQTQTENPSGCMCAFFQFFDFHPFHFTTINNQQQQTTFNSASYIQQDHNAIPKGAEAPRNSLESEGGTISFPSKEEIFKIPKNIQIKTSRDTKTTTSGGNLNDLSNSPGIKTPTLVARLMGLDLLPHSPSSSSSSCIPTSNPQCNVPNLHHLRPKQHIQTKPRNSIDSEIGATRSLPETPRISSARRSDVEYHHRLSLQINKENNIVLGEDFDLPKSSFSKRRYDENNSISPSHYARQIVKQVKESVARKVGQDITNTLKSKEQTKEEILGQLRIKKSSKTSEHSNSNHSSYSPRLRFMDSTNKHKQSTTPLPLIPKDQNQSTQQPQLPRVLTKPKPPQPALLPYQQELQKQKTVPKCKNVSNEIFNSKIKRPPQTTDIIRNKQEDSFITIRPTSPTRFNDIKPTKSKKTRSLSNTILDNINSVPNILPIKIDPSPPATKIPQKQLSDGWSHKYKQEGTNTLATRESRNNEEDKPNGTASTMVAQEHKPEFQYITGILNRTITTTKLVFFNQWFSPTHPLDPSIFQHLEQHHNDKGFNFTAKHQLGHRWNRKLLFELVDEVLLEIISPRKREKKLWFLHGCCWYEGNVEGLVESVWKRIERFPCAKCEVLEDIDGLIKSEDMEKVKVESEEGLEEEGEKLVAEIEADIWDKLMHETIMAMDGHGTSFTTRSTITHRAS 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0888 701 MobiDBLite consensus disorder prediction 482 504 - -
Lal2g0888 701 MobiDBLite consensus disorder prediction 293 360 - -
Lal2g0888 701 MobiDBLite consensus disorder prediction 307 353 - -
Lal2g0888 701 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 685 - -
Lal2g0888 701 Pfam Domain of unknown function (DUF4378) 513 678 IPR025486 -
Lal2g0888 701 Pfam DUF761-associated sequence motif 129 152 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0888 Lal-Chr2 5817700 5821580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0888 106 679 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 34.564 2.84e-54 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0888 - - lang:109352191 1129.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0888 2 5817700 5821580 Lal2g0888 2 5817700 5821580 ECH
Lal2g0888 2 5817700 5821580 Lal9g0780 9 5549363 5550694 LSH
Lal2g0888 2 5817700 5821580 Lal13g0026 13 158285 161093 PCT
Lal2g0888 2 5817700 5821580 Lal24g0029 24 199475 202794 PCT
Lal13g0026 13 158285 161093 Lal2g0888 2 5817700 5821580 PCT
Lal24g0029 24 199475 202794 Lal2g0888 2 5817700 5821580 PCT