Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0850 ATGTCGCTGAACATGAAAACCCTAACTCAAGCATTAGCCAAAACCGCCGCGGTCATCGAGAAAACCGTTACAACCACCGTCCATGAAGTCACCGGACCCAAGCCTCTCCATGATTACGACCTCCTCGACCAGATCGGTTCCGCGGGACCCGGTCTCGCGTGGAAGCTATATTCCGCGAGAGCGCGTGATCCTTCCCGTAAGCACCAGTATCCTGTCGTGTGCGTTTGGGTGTTGGATAAGCGTGCTTTATCGGAGGCGCGATTGCGTGCTGGATTGACCAAAGCAGCGGAGGATTCGTTTTTGGATTTGATTCGGACCGATGCGGCGAAGCTTGTTAGATTGAGGCACCCTGGTGTGGTGCATGTGGTTCAGGGGTTGGATGAGAGTAAGAATGCGATGGCGATGGTTACTGAACCGTTGTTTGCTTCGGTTGCCAATACGCTTGGGATTTTGGATAATGTTGCTAATGTTCCTAAAGAGCTTAGGGGAATGCAAATGGGACTTTTGGAGGTGAAACATGGTTTACTTCAGATAGCAGAATCCTTGGACTTTCTACACAACCATGCTCATCTTATTCATCGAGCAATATCACCCGAGAATGTTTTTATCACCTATAGTGGAGCCTGGAAACTCGGTGGATTTGGTTTTGCAATTTCAGTTTCTCAGACCACTTCTGACTCATCTAATTTCCATTATGCTGAATATGATGTGGAGGATTCAATTTTGCCAATTCAGCCATCACTTAATTACTCTGCTCCTGAGCTGGTGAGGAGCACTGCGTCATCAGCTGGGCCCTCTTCTGATATTTTCAGTTTTGGATGCCTTGCCTACCATTTAATTGCTCGGAAGCCTCTGTTTGATTGCCACAACAACGTGAAGATGTTCACGAATACCTTGACCTACTTATCAAGTGATGCTTTCTCATCTATCCCACCGGAACTGATTCCAGACTTGCAAAGGATGCTCTCTCCAAACGAGTCTTCCAGACCAACAGCGATGGATTTTACAGGTTCGCCATTTTTTCGGAATGACACTAGGTTGCGTGCTCTGCGCTTCCTCGATCACATGCTTGAAAGGGATAACATGCAGAAGTCAGAGTTCTTAAAAGCATTGTCAGATATGTGGAAAGATTTTGATTCCCGAGTATTGCGTTACAAGGTCCTTCCACCACTTTGCGCAGAACTTAGGAATGTGGTGATACAGCCCATGATTCTACCGATGGTTCTAACTATTGCTGAGTCTCAGGACAAGAATGATTTTGAGCAATCAACACTTCCAGCCCTTGTGCCTGTCCTGAGTACTGCTTCTGGTGAGACACTGTTACTACTTGTGAAGCATGCTGATCATATAATAAATAAGACCACCCAAGAGGATTTAGTTTCACATGTTCTTCCTATGGTTGTCCGGGCCTATGATGATAATGATGCTCGTTTACAAGAAGAGGCTCTGAAAAGATCTGTATCCCTTGCCAAACAACTTGATTCCCAGCTGGTGAAACAAGTGGTTTTGCCCCGTGTGCATGGCTTAGCACTTAAAACAACAGTTGCTTCGGTTAGAGTCAATGCTTTACTGTGCCTAGGAGACATGATTAACCGGCTTGATAAGCATGCTGTCGTGGACATCTTGCACACTATTCAGCGATGTACTGCAGTTGACCGTTCTCCGCCAACTCTTATGTGTACACTTGGGGTTGCAAATTCTATTTATAAGCAGTATGGGGTAGAATTTGTTGCTGAGCATGTTCTTCCACTGCTTATGCCCCTCCTGACTGCTCAACAACTGAATGTCCAGCAGTTTGCAAAATATATGCTCTTCGTCAAGGACATGCTCCAGAAGATAGAAGAGAAGCGAGGAGTAGCTGTGACAGATTCTGGAATCCCAAAGGTAAAAATGTCTCCTGGGGTTAATGGACTTCAAACTGAAGCCCTTGGGACAAGAAACAGCACTGTTGCTTCAGCAAAAAATGGTGCCTCTTGGGATGAAGATTGGGGGCCTGCAGCAAAGGGTACTGCCACATCTGTCCAGAATTCTATTCATACAACCAATCAATCTGTGCCAGGCAACCCTGTTGGTCAAGTAACATCTTTACAAAACCATGTGTCGTTATCTGGTGTATCTAACCAGCCGACTACCAAATCATGCCCCTCGGTGGATTTAGAGTGGCCACCTCGTGCACCTGTTGGTGTTACCCCACAGTATGGTAATGCTGAAAAGCATACAGTAGCAACAGGAACCTTATCCACATCTAATTTTCAAGATGGTGATCCTTTTTCTGATTGGCCTCCACGTCCCAGTGGCTCATTATCAGGTGGATCTGGAACTTCCATCAATGGTAATTTTGTGATGCCTTCAATGACTACCACTTCAAACAATATCGGTCTCCTACCCAGCAACAATTGGTCTGTTAATTCCCAAAGTTCTGCACAGTCTCTCAGTTTCAACCAAGGGAATGGTAGTTCAACCACCGGTAGCCTGAATATTGGTCTCAAACCTCCAAATTCTCTTGCGTCCCTCAAACAGGATCACCAGTTTCCATCATCAAATGGTTCATATAATAGTGTCAACTCAACAGATCTTGGATCAATCTTTGCTTCCAACAAGAATGAACAGTTTGCACTTAAACTCGCTCCACCTCCTTCAACCACAGTGGGTAGAGGAAGAGGGAGGGGAGCTGGCTCAACCACCCGGTCCTCTAATACCAAGTCACATTCTGAGCAACCGCCTCTTATGGATTTGTTGGGGTAG 2745 0.4594 MSLNMKTLTQALAKTAAVIEKTVTTTVHEVTGPKPLHDYDLLDQIGSAGPGLAWKLYSARARDPSRKHQYPVVCVWVLDKRALSEARLRAGLTKAAEDSFLDLIRTDAAKLVRLRHPGVVHVVQGLDESKNAMAMVTEPLFASVANTLGILDNVANVPKELRGMQMGLLEVKHGLLQIAESLDFLHNHAHLIHRAISPENVFITYSGAWKLGGFGFAISVSQTTSDSSNFHYAEYDVEDSILPIQPSLNYSAPELVRSTASSAGPSSDIFSFGCLAYHLIARKPLFDCHNNVKMFTNTLTYLSSDAFSSIPPELIPDLQRMLSPNESSRPTAMDFTGSPFFRNDTRLRALRFLDHMLERDNMQKSEFLKALSDMWKDFDSRVLRYKVLPPLCAELRNVVIQPMILPMVLTIAESQDKNDFEQSTLPALVPVLSTASGETLLLLVKHADHIINKTTQEDLVSHVLPMVVRAYDDNDARLQEEALKRSVSLAKQLDSQLVKQVVLPRVHGLALKTTVASVRVNALLCLGDMINRLDKHAVVDILHTIQRCTAVDRSPPTLMCTLGVANSIYKQYGVEFVAEHVLPLLMPLLTAQQLNVQQFAKYMLFVKDMLQKIEEKRGVAVTDSGIPKVKMSPGVNGLQTEALGTRNSTVASAKNGASWDEDWGPAAKGTATSVQNSIHTTNQSVPGNPVGQVTSLQNHVSLSGVSNQPTTKSCPSVDLEWPPRAPVGVTPQYGNAEKHTVATGTLSTSNFQDGDPFSDWPPRPSGSLSGGSGTSINGNFVMPSMTTTSNNIGLLPSNNWSVNSQSSAQSLSFNQGNGSSTTGSLNIGLKPPNSLASLKQDHQFPSSNGSYNSVNSTDLGSIFASNKNEQFALKLAPPPSTTVGRGRGRGAGSTTRSSNTKSHSEQPPLMDLLG 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0850 914 MobiDBLite consensus disorder prediction 873 914 - -
Lal2g0850 914 CDD PK_SCY1_like 45 343 - -
Lal2g0850 914 SUPERFAMILY ARM repeat 410 600 IPR016024 -
Lal2g0850 914 Pfam Protein kinase domain 104 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0850 914 MobiDBLite consensus disorder prediction 765 780 - -
Lal2g0850 914 SMART serkin_6 39 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0850 914 Gene3D - 345 618 IPR011989 -
Lal2g0850 914 Gene3D Transferase(Phosphotransferase) domain 1 156 344 - -
Lal2g0850 914 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 7 913 - -
Lal2g0850 914 MobiDBLite consensus disorder prediction 647 669 - -
Lal2g0850 914 MobiDBLite consensus disorder prediction 887 906 - -
Lal2g0850 914 Gene3D Phosphorylase Kinase; domain 1 37 138 - -
Lal2g0850 914 SUPERFAMILY Protein kinase-like (PK-like) 35 345 IPR011009 -
Lal2g0850 914 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 7 913 - -
Lal2g0850 914 MobiDBLite consensus disorder prediction 746 780 - -
Lal2g0850 914 ProSiteProfiles Protein kinase domain profile. 39 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0850 914 MobiDBLite consensus disorder prediction 803 852 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0850 Lal-Chr2 5515727 5525091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0850 110 386 MAP Kinase Gene Family AT2G01450 25.641 4.16e-11 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL2 Lal2g0850 Pkinase 1.1e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0850 K17541 - gmx:100796211 1419.45