Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0843 ATGGCTTCAATTCATCCACAACTATCTCCTCTTTCATTTTCCTCTTCTTTACTTACAACCTCTCTTCACTTCCCATCATCCCTTTCACTATCACACCCACACCGTTTTTCTTTCTTCTGTAATGCTTCATGGCAAGAGCTTGCTGGAGTGTTAGTATTCTCAGCTATTCCTTTCAGTGCTGTGAAAGCTATAGCTAATAGTCCGTTAGGGGAATCACTTCAGAAGAGAATGGAGCAGACTAAGAAGTTCGATTTGCAAAACTCAGCTAAATTCAAAGCCTTAGCCAAAAAGGCCAGAAAGGAGAGCTTTTGGTATGGAGAAGATCGGCCTCGTTGGCTAGGTCCTATTCCATATGATTATCCGTCGTATCTTACTGGGGAACTACCTGGGGATTACGGCTTCGACATTGCTGGCCTTGCCAAGGATCCTGTGGCATTGCAGAAATACTTCAACTTTGAGATATTGCATGCTCGGTGGGCTATGCTTGCATCTGTTGGTGCTCTAATTCCTGAAATACTAGACCTATTGGGAGCTTTTCACTTTGTAGAACCTGTCTGGTGGCGTGTTGGTTATTCAAAGCTCAAGGGAGATACTCTAGATTACCTCGGCATCCCAGGCCTTCACTTAGCTGGAAGTCAGGGCGTGATCGTGATTGCTATTTGCCAAGCACTCCTTATGGTTGGACCAGAGTATGCTAGATATTGTGGGATCGAGGCGTTGGAGCCTCTAGGAATATATCTTCCGGGAGATATAAACTATCCTGGAGGAGCATTGTTTGATCCCTTAAATCTGTCCAAAGATCCTGAAGCTTTTGAGGCGCTGAAGGTGAAAGAAATAAAAAATGGGCGCTTGGCAATGGCTGCTTGGTTAGGCTTTTACGTTCAAGCGGCTCTGACCGGTAAAGGTCCTGTGCAAAATCTTGTCGAGCACATCTCCGATCCTTTCCACAATAACGTGCTGAGTTCACTGATCTTCATGAAAGTAGTGTTGTAA 993 0.4481 MASIHPQLSPLSFSSSLLTTSLHFPSSLSLSHPHRFSFFCNASWQELAGVLVFSAIPFSAVKAIANSPLGESLQKRMEQTKKFDLQNSAKFKALAKKARKESFWYGEDRPRWLGPIPYDYPSYLTGELPGDYGFDIAGLAKDPVALQKYFNFEILHARWAMLASVGALIPEILDLLGAFHFVEPVWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSKDPEAFEALKVKEIKNGRLAMAAWLGFYVQAALTGKGPVQNLVEHISDPFHNNVLSSLIFMKVVL 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0843 330 Gene3D Chlorophyll a/b binding protein domain 111 322 - -
Lal2g0843 330 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 41 319 IPR001344 GO:0009765|GO:0016020
Lal2g0843 330 SUPERFAMILY Chlorophyll a-b binding protein 103 323 - -
Lal2g0843 330 Pfam Chlorophyll A-B binding protein 121 296 IPR022796 -
Lal2g0843 330 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 7, CHLOROPLASTIC 41 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0843 Lal-Chr2 5474790 5477786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0843 39 323 Chloroplast and Mitochondria Gene Families AT1G76570 78.947 3.33e-175 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0843 K14172 - gmx:100786260 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0843 2 5474790 5477786 Lal1g0785 1 5325590 5328466 LSH