Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0839 ATGAAACTATATTTCATATATTCTAATAAGATGAGTTGCTTTTATTGTCTTGCTTCACGTGAAAAGGATTTCAATAGAGTAGATGAAAAAGATAGAGAAAGCTTAGGGGCTTCAGGTTTCAGTTTCCATGAGCTTTCATTAGCAACAAAGGGTTTTAAGGAAGAAAATTTGATTGGGGAAGGAGGTTTTGGAAAGGTTGTAGCTATAAAACAATTAAACCTTGATGGTCAACAAGGTTCTAATGAATTTGTGACTGAGGTTATTATGTTAAGCCTCTTCGACCATCCTAATCTTGTTAAGTTATTTGGATATTGCACTGATGGAGATCAAAGACTTTTGGTTTATGAATATATGCCTATGTGTAGCCTTGAATATCATCTTTTTGATCCAGAGAAAAAAGCACTAAGTTGGAAGATTCGAATGAAGATAGCTGTTGGAGCTGCAAGAGGCCTTGAATATCTTCAATGCAGAGCATATCCACCAGTTATATACCGTGACTTGAAATCTGCCAACATCTTATTAGACCATGATTTTAACCCTAAACTCTCAGATTTTGGACTTGCTAAACTTGGACCAATTGGAGACAAAACACATGTTTCAACCAGAGTTATGGGAACTTATGGTTATTGTGCCCCAGAGTATGCTATGAGTGGCAAATTAACTCTTAAATCTGATATATACAGCTTTGGTGTGGTCTTGTTAGAGTTGATCACTGGACATAAGGCTTTAGATTTTAACAGAAAATCTGGACAGCAAAACTTAGTTGCATGGTTTCGTCCATATTTCAATGAGAGAAGAAAATATTCAAAAATGGTTGACCCACGTTTGGAAGGAAACTACCCTTTACGCAGTTTGCACCATGCAATTGCCATTACTGCAATGTGTCTCCAAGAAGACGCAAATCGCCGTCCACTTGTTAGTGATATTGTTATTGCACTCGAATACATTGCTTCTAAGAGTAATTCTCATTGCAACACTTGTCAACAACCACAACCAGAAACAGATATCAACTAA 1014 0.3659 MKLYFIYSNKMSCFYCLASREKDFNRVDEKDRESLGASGFSFHELSLATKGFKEENLIGEGGFGKVVAIKQLNLDGQQGSNEFVTEVIMLSLFDHPNLVKLFGYCTDGDQRLLVYEYMPMCSLEYHLFDPEKKALSWKIRMKIAVGAARGLEYLQCRAYPPVIYRDLKSANILLDHDFNPKLSDFGLAKLGPIGDKTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGHKALDFNRKSGQQNLVAWFRPYFNERRKYSKMVDPRLEGNYPLRSLHHAIAITAMCLQEDANRRPLVSDIVIALEYIASKSNSHCNTCQQPQPETDIN 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0839 337 PANTHER OS07G0668900 PROTEIN 26 322 - -
Lal2g0839 337 ProSiteProfiles Protein kinase domain profile. 52 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0839 337 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Lal2g0839 337 Gene3D Transferase(Phosphotransferase) domain 1 118 334 - -
Lal2g0839 337 SUPERFAMILY Protein kinase-like (PK-like) 34 314 IPR011009 -
Lal2g0839 337 PANTHER OS07G0668900 PROTEIN 26 322 - -
Lal2g0839 337 Pfam Protein kinase domain 64 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0839 337 Gene3D Phosphorylase Kinase; domain 1 15 117 - -
Lal2g0839 337 SMART serkin_6 52 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0839 Lal-Chr2 5442505 5444891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0839 25 336 Glycoside Hydrolase AT3G07070 56.156 2.50e-130 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lal2g0839 Pkinase 5.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0839 - - lang:109352138 611.298