Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0833 ATGGATCAAAAAATAGACCCAAGGAGTGGATTCTCTAGCTCCAATTCAATCTATTACAGTAAGCGAAAACCACTCTCACTTATTCAAAACCCATTCTTAGACATAACCACCTTCATCTCTTCCCACAGCCACAACGGCAACGTTGCCTTTATCGACTCCGCCACCGGCCACCAATTCACCTACCACCAACTCTGGCTCGCCGTCGACGCCGTTTCCTCATCCCTCTCCTCCATCGGTATCCGTAAAGGTGATGTTGTCTTCATCCTCTCCCCTAACTCCATCTACTTCCCCGTCGTCTCTCTCTCCGTCATGTCCCTCGGCGCCATCATCACCACCACCAATCCCCTCAACACCGCTAACGAAATCGCCAAACAGATCAAAGATTCTAAGCCCGTCATTGCCTTCACCACTTCTCAACTCGTTCCTAAAATAACCGCTTCTTCACCGAATCTCCCTATCATCCTCATGGACGAAGAAGAAGAAAAAACGAAAGAACAGAGGAAAACGATTTCAACTCTTCAAGACATGATGAGGAGAGAACCTTCGATCAACCGAGTCAAGGAGCGAGTCAACCAGGACGATACTGCTACGCTTTTATACTCGTCTGGCACAACTGGACCAAGCAAAGGTGTGCTTTCGTCACACAAAAACTTAATCTCAATGGTGCAAATCGTTCATAGAAGGTTCGACGCCGTAGATCCACAAACATTCATTTGCACGGTGCCGATGTTTCACGTGTACGGTTTAGCAGTGTTTGCAACTAGTCTTCTAGCAATAGGTTCAACGGTTGTAGTGCTATCGAAATTCGAGATGCATGATCTTCTGTTTTCGATTCAGAAGTTTCGCGCTACTTATCTTCCTCTGGTGCCGCCAATTCTGATTGCGATGATAAACAACGCGGATGCGATTAAGAGGAAGTACGATTTGAGTTCATTGCATACGGTGCTGTCGGGTGGTGCACCGCTGAGTAAGGAAGTGACAGAAGGGTTTGTGGAGAAGTATCCTAAGGTGACGATTTTGCAAGGGTATGGGTTGACGGAATCTTCTAGTATTGGGAGTTCTACGGATTCGTTGGAAGAGAGTAGAAGGTACGGTACGGCGGGGCTGTTGTCGCCGTCGGTGGAGGGAAAGATTGTTGACCCGGAGTCTGGGGAGGCGCTGCCGGTTAACCGAACCGGTGAGCTTTGGCTTAGGGGTCCCTTCATCATGAAAGGATATTTCGGTAACCAGGAAGCAACTGCATCAACCCTTGATTCAGAGGGATGGTTAAGAACAGGGGATGTTTGCTACATTGATAATGATGGATTCTTATTTATTGTCGATAGGTTGAAGGAGCTGATTAAATACAAGGGATATCAGGTCCCTCCAGCAGAACTCGAAGCCTTGTTGCTGACTCATCCTGATATTTCAGATGCTGCTGTTATACCGTACCCAGATAATGAAGCTGGACAGATTCCAATGGGATATATAGTGAGGAAGACCGGAAGTAGCTTATCAGAAAAAGAAGTTATCGATTTTGTTGCAAAACAGGTGGCTCCTTACAAAAGAATTCGAAGAGTGTCGTTTATATCTTCCGTACCCAAAAATCCATCTGGTAAAATTCTTAGGAAGGATCTCATCAAGCTTGCAACCTCTAAACTCTGA 1644 0.4629 MDQKIDPRSGFSSSNSIYYSKRKPLSLIQNPFLDITTFISSHSHNGNVAFIDSATGHQFTYHQLWLAVDAVSSSLSSIGIRKGDVVFILSPNSIYFPVVSLSVMSLGAIITTTNPLNTANEIAKQIKDSKPVIAFTTSQLVPKITASSPNLPIILMDEEEEKTKEQRKTISTLQDMMRREPSINRVKERVNQDDTATLLYSSGTTGPSKGVLSSHKNLISMVQIVHRRFDAVDPQTFICTVPMFHVYGLAVFATSLLAIGSTVVVLSKFEMHDLLFSIQKFRATYLPLVPPILIAMINNADAIKRKYDLSSLHTVLSGGAPLSKEVTEGFVEKYPKVTILQGYGLTESSSIGSSTDSLEESRRYGTAGLLSPSVEGKIVDPESGEALPVNRTGELWLRGPFIMKGYFGNQEATASTLDSEGWLRTGDVCYIDNDGFLFIVDRLKELIKYKGYQVPPAELEALLLTHPDISDAAVIPYPDNEAGQIPMGYIVRKTGSSLSEKEVIDFVAKQVAPYKRIRRVSFISSVPKNPSGKILRKDLIKLATSKL 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0833 547 Gene3D - 17 444 IPR042099 -
Lal2g0833 547 SUPERFAMILY Acetyl-CoA synthetase-like 42 545 - -
Lal2g0833 547 Pfam AMP-binding enzyme 43 449 IPR000873 -
Lal2g0833 547 Coils Coil 156 176 - -
Lal2g0833 547 PANTHER BNAA06G14440D PROTEIN 7 546 - -
Lal2g0833 547 CDD 4CL 29 539 - -
Lal2g0833 547 ProSitePatterns Putative AMP-binding domain signature. 198 209 IPR020845 -
Lal2g0833 547 Pfam AMP-binding enzyme C-terminal domain 458 533 IPR025110 -
Lal2g0833 547 Gene3D - 445 546 IPR045851 -
Lal2g0833 547 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0833 Lal-Chr2 5407798 5411958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0833 5 547 Monolignol Biosynthesis Gene Families AT1G20480 62.340 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0833 K10526 - gmx:100811344 799.275