Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0832 ATGGCGGATATGGGCTCCAATGAAGGCTCCAGTTCTGGCAATATTTCAGCTCAGTCTTTCGATTCAACTCTTCAGCTCAATATCAAGACTCTAGATTCCCGCATCCATAGTTTTCAACTGGACAAAAATATGTCTGTTTCATCATTCAAAGAGAAAATTGCCAACGAAACTGGTGTTCCAGTTAGCCGGCAACGGCTGATATTTAGAGGAAGAGTATTAAAGGATGAGCACTTTCTTTCTGAGTATCATCTCGAAAATGGACATACCTTGCATTTAGTTGAAAGGCAACCAAATCAGTCACAGGTTTCCGGTACGAGTTCCGCTGAGTCAACTGTTACAAATGGTAACCAAGGAAATGATGCTGGCTTGGGGGTTCCTCGTGTTGGACAGATTTCACACAGTGTTGTTCTCGGGACAATTAATTTGGGGGAACAAGGTGGAGGCATGGTTCCTGACATTAGTGGGGTTATTGGGGCAGTCTTGAATTCTATGGGTATTGGTGGCCAGATCAGAAATATTGTTTCTAATGCTACACAAACTTCAGCTCCATCAGGGAATGAAACTGAAGGAATACATGCTGGAAATCAAAACCTAGCAGGAAATCAAGCGCAGCCTGGACAGACATTTCGTGGCCAGGAATTCCAATCTCTGCCTCAAGTTGTTCAGATTCCTGTCCCTGCAGGGGCCATACCCCTTCCTTCGCTTAATGCTCCAATCCCTCATTCATTGACCACCCTGTCTGAGTTTATAAATAACATGGAACATACACTATCACAAAATGGTCATCGGTCAAATCTGTCATCAACTAACCAAGGAGATCAGCGCATAGAATTGCCAACCAATGCACAAGGGTTGCCAACGCTTGAAGCATTAAGTGTCATCTTGCGTCGCACTGGACAATTGCTTAGTGATAACACTGTTCCCGCACTATGTCATATTGCAGGACACTTAGAGCGGGATGGAACTTCTTCTGATCTAAGTGTAAGAGGCCAAATTCAGTCAGAGACCATGCAAACTGGAATTGCCATGCAGCATTTAGGTGCACTTCTTCTTGAGCTTGGCCGAACAATGTTGACACTGCGTATGGGGCAGTCTTATGCTGAATCTTCTGTTAATGCTGGACCAGCAGTTTATATTTCTCCAGCAGGACCAAATCCTATAATGGTGCAGCCCTTTCCACTTCAGACAAGCTCTCTTATTGGTGGTCCTGTTCCTTCTTCAACTCCTCCAACACTTGGCGCTGTTGCTGTTGGAAGTGTTCCTAGGAACGTAAACATTCATATACATGCTGGAACCACTCTTGCACCAATTGTTTCATCAGCTGGTTCTAGACTAAATAATGGGGAAGGGACAGGAGGTGAACACCATAGCGAGCTTGGCTCTGGTGTTGGAGTTGCTAGCGGCACAGAAACTGGGTTTGGTGTTTCTACTTCACAGCCACCTTCCGATACAACTCCATTGTCAACTGTTTTAGCTGGAATCAATTCTCGCCTTAGAAACTTTGTTGGTAACATGCAAGCAGATAACACAGTTCTCTCAGGTCAAATAGAATCAACTAGTCAGGATTTGTCTGCTGGTTCTGACTCTACACCTGCACTGGGAAACAAACAGCGAGATAACATGGAGATGAATGGCTTAAGGGCTGCTACTGTATCCTCAGTTGGTTGTAATTCTGAAAGTGGACTACAGAAGCCCCAAACAGAGGCAGCCCCAACCTGTAGTAGTGGCGAGAGAGATGTTTCAGTTGACAAATTTGTTTCCGATCAAGGTTGTTCAAGCAGAGAAACAATAGTAAAATCAGAAAAAGTACTAGGTGCTCCATCTGTAAGTGAAGAACGAGATGTAACTGAACCTGCCAAAGCTGCTCCATTAGGATTGGGTATGGGTGGTCTTGAGCGTAAGAAGCAAACTCGACCTCAACCTGCTGTAAGTAAAGGTTCTGGTGATGGATCATCTGGTTCTTCTGCCAATCAAAGTCAGCAAACTAGAACAGATGGACAACGTTTATTGCAAACTCTTGCCAGTCATGGATCTACTGTGAAATTGGGAAACCCTAATGGGCCATCCCGGCAGCCCCTGCCCACCGATGATAGCCAGATTGATATGGCTGGTTTGATGTCTCAGGTTTTGCGTAGCCCCGCTATGAATGGTTTACTGTCAGGGGTTTCACAGCAAACTGGAGTTGACTCACCGGATGGCTTGAGGAATATGTTGCAACAGTTCACACAAAACCCACAAATGATGAACACAGTCAATCAAATTGCGGAACAGGTTGGCAGCCAAGATATTGGAAATATGTTTGCTGGAATGGGAAGTGGGCAAGGTGGTGGTATTGACTTGTCAAGGATGTTTCAACAGATGATGCCAATTGTATCTCGAGCCCTTGGTGGGGAGACTCCTCCCCCACTATTCTCTGCAACAGGACCACAGCCCCAGGCACCCTACAGAGATGGAACACTTGACGCAGATGATAATCAAAGTTTACAGCTCAACCTTCAACCAGTGGTGGAGAGGATTGAGCATGTGAGCCCACCTGCAGATGTTTTCCGTGCTGTAGCTGAAAATGCTGTCCATGTAACCGGCAATGGAAGTGCTTCTAATGATCTCCTGGAGGAGTTATGCAGCAATGAGAGTCTTGCCAGTGAATATGCGGAGATGTTACGAAATGATGTAAAACTGCGATTCAAGGGACATTCTGAGCCGGACAAGTCCTAA 2715 0.4545 MADMGSNEGSSSGNISAQSFDSTLQLNIKTLDSRIHSFQLDKNMSVSSFKEKIANETGVPVSRQRLIFRGRVLKDEHFLSEYHLENGHTLHLVERQPNQSQVSGTSSAESTVTNGNQGNDAGLGVPRVGQISHSVVLGTINLGEQGGGMVPDISGVIGAVLNSMGIGGQIRNIVSNATQTSAPSGNETEGIHAGNQNLAGNQAQPGQTFRGQEFQSLPQVVQIPVPAGAIPLPSLNAPIPHSLTTLSEFINNMEHTLSQNGHRSNLSSTNQGDQRIELPTNAQGLPTLEALSVILRRTGQLLSDNTVPALCHIAGHLERDGTSSDLSVRGQIQSETMQTGIAMQHLGALLLELGRTMLTLRMGQSYAESSVNAGPAVYISPAGPNPIMVQPFPLQTSSLIGGPVPSSTPPTLGAVAVGSVPRNVNIHIHAGTTLAPIVSSAGSRLNNGEGTGGEHHSELGSGVGVASGTETGFGVSTSQPPSDTTPLSTVLAGINSRLRNFVGNMQADNTVLSGQIESTSQDLSAGSDSTPALGNKQRDNMEMNGLRAATVSSVGCNSESGLQKPQTEAAPTCSSGERDVSVDKFVSDQGCSSRETIVKSEKVLGAPSVSEERDVTEPAKAAPLGLGMGGLERKKQTRPQPAVSKGSGDGSSGSSANQSQQTRTDGQRLLQTLASHGSTVKLGNPNGPSRQPLPTDDSQIDMAGLMSQVLRSPAMNGLLSGVSQQTGVDSPDGLRNMLQQFTQNPQMMNTVNQIAEQVGSQDIGNMFAGMGSGQGGGIDLSRMFQQMMPIVSRALGGETPPPLFSATGPQPQAPYRDGTLDADDNQSLQLNLQPVVERIEHVSPPADVFRAVAENAVHVTGNGSASNDLLEELCSNESLASEYAEMLRNDVKLRFKGHSEPDKS 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0832 904 Gene3D - 13 108 - -
Lal2g0832 904 SUPERFAMILY Ubiquitin-like 17 98 IPR029071 -
Lal2g0832 904 MobiDBLite consensus disorder prediction 640 696 - -
Lal2g0832 904 MobiDBLite consensus disorder prediction 470 486 - -
Lal2g0832 904 PANTHER OS07G0498800 PROTEIN 6 902 - -
Lal2g0832 904 CDD Ubl_ubiquitin_like 26 93 - -
Lal2g0832 904 MobiDBLite consensus disorder prediction 518 537 - -
Lal2g0832 904 Pfam Ubiquitin family 26 96 IPR000626 GO:0005515
Lal2g0832 904 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 6 902 - -
Lal2g0832 904 PRINTS Ubiquitin signature 34 54 IPR019956 -
Lal2g0832 904 PRINTS Ubiquitin signature 55 75 IPR019956 -
Lal2g0832 904 PRINTS Ubiquitin signature 76 97 IPR019956 -
Lal2g0832 904 ProSiteProfiles Ubiquitin domain profile. 24 99 IPR000626 GO:0005515
Lal2g0832 904 MobiDBLite consensus disorder prediction 556 574 - -
Lal2g0832 904 MobiDBLite consensus disorder prediction 97 120 - -
Lal2g0832 904 MobiDBLite consensus disorder prediction 445 486 - -
Lal2g0832 904 MobiDBLite consensus disorder prediction 97 125 - -
Lal2g0832 904 MobiDBLite consensus disorder prediction 179 206 - -
Lal2g0832 904 SMART ubq_7 24 95 IPR000626 GO:0005515
Lal2g0832 904 MobiDBLite consensus disorder prediction 556 578 - -
Lal2g0832 904 MobiDBLite consensus disorder prediction 605 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0832 Lal-Chr2 5394248 5405682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0832 24 95 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 34.722 3.82e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0832 - - lang:109325669 1335.86