Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0825 ATGAGCAAAGTTATGCTTATTTTGGCTAGCATCCTCGGATTATGCCTTTTCACTATCAATAATACCTATGCCTTCTCACCCTCTGGGTGGATCAATGGCCATGCCACTTTCTATGGTGGTAGTGATGCCTCAGGAACAATGGGAGGAGCTTGTGGTTATGGGAATTTGTACTCAGCAGGTTATGGAACTAGAAGTGCAGCATTAAGTACTGCCTTATTTAATGAAGGAGCTTCGTGTGGAGAGTGCTACAAAATCATATGTGACTATAAAACAGACCCAAGATGGTGCATTAAAGGAAGATCTATAACCATAACTGCCACAAACTTTTGCCCTCCTAATTTTGATCTTCCTAGCAACAATGGAGGCTGGTGCAACCCACCTCTCAAGCATTTTGATATGGCTCAACCCGCTTGGGAAAAGATTGGTATTTACAGAGGAGGGATCGTTCCCGTGTTATTTCAAAGGGTCCCATGCAAAAAACATGGAGGGGTTAGGTTCAGTATCAATGGCAGAGACTACTTTGAGCTTGTGCTAATAAGCAATCTGGGTGGGGCTGGATCTGTCGAATCTGCATCCATTAAAGGTTCAAAAACTGGATGGATGACTATGTCAAGAAACTGGGGTGCTAATTGGCAATCCAATGCTTACTTGAATGGTCAATCTTTGTCCTTCAGGGTCACAACCACTGATGGAGAAACTAGAGTTTTCCCAAATGTGGTTCCACCAAATTGGGCATTTGGCCAAACTTTCTCTACCCATGTCCAATTCTTATAA 774 0.4302 MSKVMLILASILGLCLFTINNTYAFSPSGWINGHATFYGGSDASGTMGGACGYGNLYSAGYGTRSAALSTALFNEGASCGECYKIICDYKTDPRWCIKGRSITITATNFCPPNFDLPSNNGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVLFQRVPCKKHGGVRFSINGRDYFELVLISNLGGAGSVESASIKGSKTGWMTMSRNWGANWQSNAYLNGQSLSFRVTTTDGETRVFPNVVPPNWAFGQTFSTHVQFL 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0825 257 PANTHER EXPANSIN 4 256 - -
Lal2g0825 257 Gene3D - 16 159 IPR036908 -
Lal2g0825 257 SUPERFAMILY Barwin-like endoglucanases 29 181 IPR036908 -
Lal2g0825 257 PRINTS Expansin/Lol pI family signature 29 44 IPR007118 GO:0005576
Lal2g0825 257 PRINTS Expansin/Lol pI family signature 47 65 IPR007118 GO:0005576
Lal2g0825 257 PRINTS Expansin/Lol pI family signature 69 87 IPR007118 GO:0005576
Lal2g0825 257 PRINTS Expansin/Lol pI family signature 146 162 IPR007118 GO:0005576
Lal2g0825 257 PRINTS Expansin/Lol pI family signature 200 214 IPR007118 GO:0005576
Lal2g0825 257 PRINTS Expansin/Lol pI family signature 238 252 IPR007118 GO:0005576
Lal2g0825 257 Pfam Lytic transglycolase 66 152 IPR009009 -
Lal2g0825 257 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 48 163 IPR007112 -
Lal2g0825 257 Pfam Expansin C-terminal domain 164 241 IPR007117 -
Lal2g0825 257 SUPERFAMILY PHL pollen allergen 160 251 IPR036749 -
Lal2g0825 257 PANTHER EXPANSIN-A15 4 256 IPR002963 GO:0009664
Lal2g0825 257 SMART dpbb_1 65 153 IPR007112 -
Lal2g0825 257 PRINTS Expansin signature 60 74 IPR002963 GO:0009664
Lal2g0825 257 PRINTS Expansin signature 89 100 IPR002963 GO:0009664
Lal2g0825 257 PRINTS Expansin signature 102 112 IPR002963 GO:0009664
Lal2g0825 257 PRINTS Expansin signature 121 138 IPR002963 GO:0009664
Lal2g0825 257 PRINTS Expansin signature 138 151 IPR002963 GO:0009664
Lal2g0825 257 PRINTS Expansin signature 162 174 IPR002963 GO:0009664
Lal2g0825 257 PRINTS Expansin signature 174 195 IPR002963 GO:0009664
Lal2g0825 257 PRINTS Expansin signature 209 230 IPR002963 GO:0009664
Lal2g0825 257 PRINTS Expansin signature 238 254 IPR002963 GO:0009664
Lal2g0825 257 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 173 252 IPR007117 -
Lal2g0825 257 Gene3D - 163 257 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0825 Lal-Chr2 5339482 5341943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0825 1 256 Expansin Gene Family AT4G01630 61.089 1.34e-117 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0825 - - lang:109341531 516.538