Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0804 ATGAAAGAGAATTCTGACCAGACTCGTATCGGATCTGCATTTGACAAGTTGGTGAAGCAACTTGGGGAACCTGTTGACTTTGAATTGCCAGAGTGGTTTGCTAAGTCGAAGCCAATGAAATACACCTTTATAAAGCGCAATATATATCGCACAAAGAAGTTCAAGAGACGGTTTGATGACGGAATATTCTGTTCCTGCACTCTTTCACCTGAATCTCCTAGTGTATGTGGTAGAGATTGCCACTGTGGGTTGCTTCAGTCTAGCTGTTCTTCAAGCTGTAAATGTGGGAGCTCTTGTATGAACAAAGCATTTCAGCATCGTCCTGTGAAAAAGATGAAATTGGTTCAGACTGAAAAATGTGGTTTTGGAATTGTGGCTGACGAAGATATAAAGCGAGGTGATTTTGTTATAGAATATGTTGGAGAAGTCATTGATGACAAGGCCTGTGAAGAAAGGCTTTGGGTCATGAAACGTCGTGGGGATACAAACTTTTACTTGTGCCAAATCAATCGAGATATGGTGATTGATGCAACAAATAAGGGAAATAAATCAAGATATATCAATCATAGTTGCTGCCCCAATACTGAGATGCAGAAATGGATAATTGATGGTGAAACAAGAATTGGCATATTTGCAACTCATGACATACAAAAGGGCGAGCATTTGACTTATGATTACCAGTTTGTTCAGTTTGGTGCAGATCAAGATTGCCACTGTGGTGCTGTTGGTTGTAGGCGCAAGCTGGGCGTCAAACCTGGCAAGCCTAAATTGTCTTCACATGCATGTCAGGTTTATCGGAAAGGAGGTTTGCAAATTGGAAGTTATGATGTTGCTGACCAATCAAAGTGGTTACACAATTGCATTGGTGAAGTTATTAGGATAAAACACTTTGAAAATGTGAGGTTCGGGAGTATTAAACGGTTTGATAACTCTTCCCAAAAGCACTCAATCATGTTTGAGGATGGCTGTGTTGAAATTTATGACATGTCAAAAGAAGACTGGGAACTAGTGAGATTGTGA 1020 0.402 MKENSDQTRIGSAFDKLVKQLGEPVDFELPEWFAKSKPMKYTFIKRNIYRTKKFKRRFDDGIFCSCTLSPESPSVCGRDCHCGLLQSSCSSSCKCGSSCMNKAFQHRPVKKMKLVQTEKCGFGIVADEDIKRGDFVIEYVGEVIDDKACEERLWVMKRRGDTNFYLCQINRDMVIDATNKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATHDIQKGEHLTYDYQFVQFGADQDCHCGAVGCRRKLGVKPGKPKLSSHACQVYRKGGLQIGSYDVADQSKWLHNCIGEVIRIKHFENVRFGSIKRFDNSSQKHSIMFEDGCVEIYDMSKEDWELVRL 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0804 339 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 35 281 IPR025787 -
Lal2g0804 339 Pfam SET domain 121 226 IPR001214 GO:0005515
Lal2g0804 339 SMART set_7 110 233 IPR001214 GO:0005515
Lal2g0804 339 ProSiteProfiles AWS domain profile. 59 108 IPR006560 GO:0005634|GO:0018024
Lal2g0804 339 ProSiteProfiles Post-SET domain profile. 233 249 IPR003616 -
Lal2g0804 339 PANTHER SET DOMAIN PROTEINS 7 337 - -
Lal2g0804 339 ProSiteProfiles SET domain profile. 110 227 IPR001214 GO:0005515
Lal2g0804 339 SMART shorttest3 59 109 IPR006560 GO:0005634|GO:0018024
Lal2g0804 339 Gene3D SET domain 30 265 IPR046341 -
Lal2g0804 339 SMART PostSET_3 233 249 IPR003616 -
Lal2g0804 339 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHH3 7 337 - -
Lal2g0804 339 SUPERFAMILY SET domain 24 239 IPR046341 -
Lal2g0804 339 CDD SET_ASHR3-like 111 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0804 Lal-Chr2 5192779 5209644 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0804 89 248 C2H2 Transcription Factor Family AT2G23740 36.111 3.34e-24 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lal2g0804 SET 1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0804 - - gmx:100808183 568.54