Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0788 ATGGAGGAAAGAGAGATTTTTGGTTCTGAGCATGTGGTTAAGGGTAATGAGGCCACAGATAGCTTCCACGTGGCACCGAGAACAGAAAACATGGTGCAGTTTCCCGGCACGGCGGCGGAGTTGCCGGATGTGACGCTGGTCAGTGCGGTGGTGACACCAGGAATTGAAGTGAAGAAGAAAAGGGGCAGGCCTAGGAAATATGGACCGGACGGCAAGGTAGCAGCAGCAGCGATGGCGCTGTCACCGATGCCGATATCGGCGTCGATTCCGTGGACCGGACAGTTCTCAGCTTGGAAAAGGGGTAGAGGGAAGTCTGTTGAATCAATGAAGAAGTCAAAGTTTTATGAAGTTGAAAATGCTGGACCAGGTTATGGAATTGCATATTCTGTTGGTGCCAATTTCACTCCTTACGTGCTTACAGTAAATGCTGGCGAGGATATTACTATGAAGATTATGTCCTTCTCTCAACAGGGACACCGTGCTACATGCATTCTCTCTGCAAATGGCACAATTTCTAATGTTACACTTCGTCAACCGACTTCCTCTGGTGGTACTTTAACATATGAGGGACAGTTTGAGATTCTTTCATTGTCTGGTTCATTTATGCCAACGGAGAATGGATTTATAAAGAGCAGATCTGGCGGGATGAGTGTCTCTTTGGCAGGTCCAGATGGTCGTGTAATGGGGGGTGGACTTGCCGGTTTGCTGGTAGCTGCAGGTCCTGTGCAGGTTGTTGTGGCCAGTTTTCTTCCAGGTCAACAGCTGGAACAGAAATCGAAGAAGCCAAGGATAGAGCATATATCAACTACTGCTCCAACACAAGTTAACCCAATTTCCGCTGAAGAAATAAAAATCAGTTTTGGTGGAGTAAAGCCTATTATGATGACACCTGCTGCTTTTCAAGTAGACAACAACTATGGTTCTTATAATAACAATGTTCAAGGCTCTAGGAACTCATCTGCTGATAATGAAGCACCTTTGCAAGAGAAGGGTTCTAACCCCAACCAATTAGATGTTGGAGGAGTTGCATGCTAA 1035 0.4638 MEEREIFGSEHVVKGNEATDSFHVAPRTENMVQFPGTAAELPDVTLVSAVVTPGIEVKKKRGRPRKYGPDGKVAAAAMALSPMPISASIPWTGQFSAWKRGRGKSVESMKKSKFYEVENAGPGYGIAYSVGANFTPYVLTVNAGEDITMKIMSFSQQGHRATCILSANGTISNVTLRQPTSSGGTLTYEGQFEILSLSGSFMPTENGFIKSRSGGMSVSLAGPDGRVMGGGLAGLLVAAGPVQVVVASFLPGQQLEQKSKKPRIEHISTTAPTQVNPISAEEIKISFGGVKPIMMTPAAFQVDNNYGSYNNNVQGSRNSSADNEAPLQEKGSNPNQLDVGGVAC 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0788 344 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 8 330 IPR039605 GO:0003680
Lal2g0788 344 Gene3D - 136 269 - -
Lal2g0788 344 MobiDBLite consensus disorder prediction 310 335 - -
Lal2g0788 344 MobiDBLite consensus disorder prediction 310 344 - -
Lal2g0788 344 CDD DUF296 135 249 IPR005175 -
Lal2g0788 344 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 8 330 - -
Lal2g0788 344 Pfam Plants and Prokaryotes Conserved (PCC) domain 136 249 IPR005175 -
Lal2g0788 344 ProSiteProfiles PPC domain profile profile. 131 273 IPR005175 -
Lal2g0788 344 SUPERFAMILY AF0104/ALDC/Ptd012-like 133 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0788 Lal-Chr2 5065424 5070704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0788 56 298 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 57.937 9.91e-87 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0788 - - gmx:100789179 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0788 2 5065424 5070704 Lal2g0788 2 5065424 5070704 ECH