Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0776 ATGTTTTCCCGACAACTCCTCTCATCGCCACCCCAACTCCACCACCACAACCACCACAACCACCACCTTCTCACCCCTATCCTTGTCACCACCGCCTTTTTCTTCTCACTCCTTCTCCTCTTCCTCTTCTTTTACTTCCGCCTCAAAAAACCCACCACCCCACCACCCGATTCCAAACCCCCACACCGCTTCTCCTACCCCCTCCTCCGCCGACTCACCAACTCCTTCTCCACCCACCTCGGCCACGGTGGCTTCGGAACAGTCTACTCCGGTACCCTTCCAACTGGAAAACCTATCGCCGTGAAGCTCATGAACTCTTCATCATACCAAGGCGAGCGTGAATTTCACAACGAAATCTTCTTCGCTTCTAACCTCATCTCCCACCACATCGTCACAGCCCTCGGTTTCTCCTCCGACCCGAAACGGCGTCGTTTCCTCTTAGTCTACGACCTCATGCAAAACGGTAACCTCCAAGACGCACTGTTGCACCGTAAATGCCCTGAACTCATGGATTGGAAGAAGCGCTTCAATATTGTTTTGGATATAGCAAAAGGACTTCAGTATCTTCATACTTGTGATCCACCAGTTATCCATGGTGACATAAAACCTAGCAATATTCTGCTCGATGCCGAGTTTTCTGCGAAAATTGGGGATTTCGGGCTTGCTCGGTTGAAATTGGAGCCCAATTATGAGGTTTTGGTTGGTGATGGTGAGGAGAAAAAGAAGGAGGAAGAAGAAGGAGTGACATGTGAGGGTGGAATTGGGGTTGATGTATGTGGTGGATCATTGATTGAGGAAACTGAGAGTGTGAATACTGGATTTTATGAGGAGGGTGGTAGTTTGGGTTTGGAGCAATCTCCTGAAGATTTTGTTAGGGTTACTATATTGGAGACGTCGCCGGAAACAACGGCTTCGATGGAAATGGGTTTTGACAAGGTTAGCGTTAAGAGTGAGAAGGATGATGTTAATAATAGTAAAGGGGTAAAGACTAATTCAATGAGAGATTGGAAAGTGAAGGATCATGTGATGGAGTGGATTGGAAAGGAAGTGAACAAGGAAAAGCCAAAGAGTGAATGGTTTGGTGAAGAAAAATTGGCAAAGTCAGAGAAGAAGAAGAAAAGGAAGGATCCGTTGGAATGGTGGGAATCGATGGAGGAGGAAAAGTTTAACAGGGATTTGAAGAAGGAGAAGAGAAGGTCTGTGAGGGAATGGTGGAAGGAGGAGTATAGTGAAGAGCTTGCGAGGAAGAAAAAGAAGAAGAATAAAGAGCAGAAGAGGAATGGTGTTACTAGTGATAATGACAATGGTGCTGATTGGTGGGTGAGTGATGATGCTTTGAATGACAATAAAAAGAAGAGCAAGAGGAGAAGTCCGAATAACCGTGGTAGTGTGGATTGGTGGTTAGATGGGCTGAGTGGTGAGCTATGGAGAGCTCGAAGGAATAGCTATGATTCTGCGGCTAGTGGAGAAATTCCGAAGAGTGGTGGTGTTAGTAGTACTCCGAGTATGAGGGGAACTGTTTGTTATGCTGCTCCTGAGTATGGTTATGGTGGAGATGTGTCGGAGAAGTGTGATGTATATAGCTTTGGGGTTTTGCTGCTTGTTGTAATTTCTGGGAGACGCCCACTGCAGGTGAACGGTTCACCGATGTCAGAGTTTCAGCGAGCAAATTTGTTGTCTTGGGCAAGGCACTGTGCTAGGAAAGGGAAGCTCATTGAGCTAGTTGATCAGTCTATTGAATCATTGGATAAAGAGCAGGCTCTTCTCTGCATCACGATCGCCCTGCTTTGTTTGCTCAAGTTACCTGCTCATCGCCCTTCGATGAAGGAGGTTGTGAGAATGCTTACTGGAGAGTTAGAGCCACCCCAGTTGCCAATTGAGTACTCACCCTCGACCCCTTCTCGCTTCCCGTTCAAGTCTCGGAAGAAAGGCCGGTGA 1938 0.4721 MFSRQLLSSPPQLHHHNHHNHHLLTPILVTTAFFFSLLLLFLFFYFRLKKPTTPPPDSKPPHRFSYPLLRRLTNSFSTHLGHGGFGTVYSGTLPTGKPIAVKLMNSSSYQGEREFHNEIFFASNLISHHIVTALGFSSDPKRRRFLLVYDLMQNGNLQDALLHRKCPELMDWKKRFNIVLDIAKGLQYLHTCDPPVIHGDIKPSNILLDAEFSAKIGDFGLARLKLEPNYEVLVGDGEEKKKEEEEGVTCEGGIGVDVCGGSLIEETESVNTGFYEEGGSLGLEQSPEDFVRVTILETSPETTASMEMGFDKVSVKSEKDDVNNSKGVKTNSMRDWKVKDHVMEWIGKEVNKEKPKSEWFGEEKLAKSEKKKKRKDPLEWWESMEEEKFNRDLKKEKRRSVREWWKEEYSEELARKKKKKNKEQKRNGVTSDNDNGADWWVSDDALNDNKKKSKRRSPNNRGSVDWWLDGLSGELWRARRNSYDSAASGEIPKSGGVSSTPSMRGTVCYAAPEYGYGGDVSEKCDVYSFGVLLLVVISGRRPLQVNGSPMSEFQRANLLSWARHCARKGKLIELVDQSIESLDKEQALLCITIALLCLLKLPAHRPSMKEVVRMLTGELEPPQLPIEYSPSTPSRFPFKSRKKGR 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0776 645 Pfam Protein kinase domain 78 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0776 645 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 5 645 - -
Lal2g0776 645 SUPERFAMILY Protein kinase-like (PK-like) 55 634 IPR011009 -
Lal2g0776 645 Gene3D Transferase(Phosphotransferase) domain 1 152 249 - -
Lal2g0776 645 Gene3D Transferase(Phosphotransferase) domain 1 480 622 - -
Lal2g0776 645 PANTHER OS07G0586332 PROTEIN 5 645 IPR044576 -
Lal2g0776 645 Coils Coil 406 426 - -
Lal2g0776 645 ProSitePatterns Protein kinases ATP-binding region signature. 80 102 IPR017441 GO:0005524
Lal2g0776 645 SMART serkin_6 74 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0776 645 MobiDBLite consensus disorder prediction 415 443 - -
Lal2g0776 645 ProSiteProfiles Protein kinase domain profile. 74 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0776 645 MobiDBLite consensus disorder prediction 624 645 - -
Lal2g0776 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Lal2g0776 645 Gene3D Phosphorylase Kinase; domain 1 49 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0776 Lal-Chr2 4968381 4970318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0776 493 616 Receptor kinase-like Gene Family AT3G58690 33.846 3.36e-12 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Lal2g0776 Pkinase 9.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0776 - - lja:Lj2g3v0473820.1 763.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0776 2 4968381 4970318 Lal2g0776 2 4968381 4970318 ECH