Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0775 ATGTTTCCTTTACAACGAAGCAATGAGCTGGTGTATCAGTTTTCTAATATCCCTCACCAACAAGATAACCAATTCTCTGGAGATCTGATTCTGGATAATTATGATTTTCTGGATGTCAATGATTCTGATAAAATATTCAGTAGTAGTATCCAACCGAAGAAACTAATTTGTGGAGCTGAAAAGAGTAACCATGGTGATTCTAACGAACATAAGAAGAAGATGGTTCATAGAGAGATTGAGAGGCAAAGGAGGCAAGAAATGGCTACACTTCATGCCTCTCTTAGATCCCTTCTTCCTCTTGAGTTCATCAAGGGAAAGCGTTCAATATCTGAGCAAATGAACGGGGCAGTGAATTATATAAAGCAGATGCAGGAGAATATCAAAGAACTTGGTGCCAAGAAAGATGAACTGAAGAAACTCACAAATTCCAAGCTGAATAACCATGTCAATAACCATTCTTCTAGCCCCTTTACCATCCATGAGAATAATGGTATTGTGAGAATTGAAGTCACCATTGGTTTCATAGAGGAAAAGCACAAACTTTCAAAGTTGATGCAGTTACTTCTTGAAGAAGAACTTGATGTTGTTAATTGCCTTTCAACTGAAATCAATGGAAGATTGTTCCACAGTGTCCACTGTGAGGTTAACAAATCCAACAGTGTTGATCAATCTGAGCTGAGATGGAAAGTTGCCAATGTAATTACATCATAA 711 0.3755 MFPLQRSNELVYQFSNIPHQQDNQFSGDLILDNYDFLDVNDSDKIFSSSIQPKKLICGAEKSNHGDSNEHKKKMVHREIERQRRQEMATLHASLRSLLPLEFIKGKRSISEQMNGAVNYIKQMQENIKELGAKKDELKKLTNSKLNNHVNNHSSSPFTIHENNGIVRIEVTIGFIEEKHKLSKLMQLLLEEELDVVNCLSTEINGRLFHSVHCEVNKSNSVDQSELRWKVANVITS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0775 236 SMART finulus 77 129 IPR011598 GO:0046983
Lal2g0775 236 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 236 - -
Lal2g0775 236 CDD bHLH_AtORG2_like 72 148 - -
Lal2g0775 236 Coils Coil 120 140 - -
Lal2g0775 236 Pfam Helix-loop-helix DNA-binding domain 72 124 IPR011598 GO:0046983
Lal2g0775 236 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 71 123 IPR011598 GO:0046983
Lal2g0775 236 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 63 138 IPR036638 GO:0046983
Lal2g0775 236 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 236 IPR015660 GO:0003700|GO:0006357
Lal2g0775 236 Gene3D - 62 155 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0775 Lal-Chr2 4963914 4965505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0775 66 228 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 40.462 5.85e-34 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lal2g0775 HLH 7.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0775 - - gmx:100780888 305.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0775 2 4963914 4965505 Lal2g0775 2 4963914 4965505 ECH