Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0773 ATGAGTGCAAAGTCAGAGATGGAGTTTGCAGTTGAAGTGGAAGTACTTGGAAGAGTGAGGCATAAGAATTTGTTAGGTTTAATGGGATTCTATGCTGGTGGTGATGAAAGGTTGATTGTCTATGATTATATGTCTAATCATAGTTTACTCACTCATTTGCATGGTTCACTTGCAAAAGAATGCAAACTAGATTGGCCTAGAAGAATGAGTATAGTAATTGGAGCAGCTGAAGGATTAGAGTATTTACACCATGAAGCAACTCCTCACATCATACACAGAGATATAAAGGCAAGCAATGTTCTTTTAGACCATGAATTCCAAGCTAAGGTTGCAGATTTTGGCTTTGCTAAGCTGGTACCTGATGGTGTAAGCCACCTTACAACAAGGGTTAAAGGCACCTTAGGATATTTAGCACCAGAATATGCCATGTGGGGGAAGGTTTCTGAGAACTGTGATGTTTATAGCTTTGGAATATTGCTTTTGGAGATTATTAGTGGTAAGAGACCAATTGAGAAACGCCCTGGAGGAGTGAAAAGGGACATTGTTCAATGGGTCACACCATATGTTAGCAAAGGTAACTTCAATCATATTGTTGATCCAAATTTGAAGGGTGAGTTTGATTTGGAGGAATTGAAAAATGTGATCACTATAGCTATGAGTTGCACTGATAGTTGCCCAGAGAAGAGGCCTAGTATGAATGAGGTGGTGGAGAGGCTCAAGAGTGGTGTTGGTGTAGGTGTAGAGAGGACATGA 753 0.4024 MSAKSEMEFAVEVEVLGRVRHKNLLGLMGFYAGGDERLIVYDYMSNHSLLTHLHGSLAKECKLDWPRRMSIVIGAAEGLEYLHHEATPHIIHRDIKASNVLLDHEFQAKVADFGFAKLVPDGVSHLTTRVKGTLGYLAPEYAMWGKVSENCDVYSFGILLLEIISGKRPIEKRPGGVKRDIVQWVTPYVSKGNFNHIVDPNLKGEFDLEELKNVITIAMSCTDSCPEKRPSMNEVVERLKSGVGVGVERT 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0773 250 Gene3D Transferase(Phosphotransferase) domain 1 45 243 - -
Lal2g0773 250 Gene3D Phosphorylase Kinase; domain 1 1 44 - -
Lal2g0773 250 SMART serkin_6 1 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0773 250 PANTHER OS01G0750732 PROTEIN 1 245 - -
Lal2g0773 250 ProSiteProfiles Protein kinase domain profile. 1 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0773 250 PANTHER - 1 245 - -
Lal2g0773 250 CDD STKc_IRAK 3 240 - -
Lal2g0773 250 SUPERFAMILY Protein kinase-like (PK-like) 7 237 IPR011009 -
Lal2g0773 250 Pfam Protein tyrosine and serine/threonine kinase 4 239 IPR001245 GO:0004672|GO:0006468
Lal2g0773 250 ProSitePatterns Serine/Threonine protein kinases active-site signature. 90 102 IPR008271 GO:0004672|GO:0006468
Lal2g0773 250 PIRSF ILK 1 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0773 Lal-Chr2 4959498 4960876 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0773 4 240 Receptor kinase-like Gene Family AT4G02010 45.041 4.55e-68 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Lal2g0773 Pkinase 3.8e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0773 - - gmx:100800710 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0773 2 4959498 4960876 Lal2g0773 2 4959498 4960876 ECH