Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0770 ATGACGGAAACCCATTTCAATTCACTGACTGACCCATGCGACAACCCTGTTTGGCTCACTGGTGTCATCACCACCGCCACCGTCACTACCACTGCTTCTACGACGGTGGCAGACTTATTGGTCAGCGAGAAAATGAGCCCTCTTGCTTCTTCATCTTTTACTCCAAAAGATAACATCCTCATTGATTGTGGTGCAGAAAATGCACCTACCCTCCCTGATGGAAGACAATTCAAATCAGACCCTCAAGCCAATTCTTTCTTGCAAGCAAATGATGACTATAAGGTTTCAGCTGGTGATGATCCTGAACTTCCTTCACCTATATACAAAACTGCAAGGATCTTCATTCAGGAAGCTGAGTATTCCTTCCATTTAGCTCATCCAGGATACCATTGGATTCGCCTTCATTTTTATCCGGTAAAAAATGATGTCTTTGATCTTCAGAAGGCCACTTTCTCTGTTAACACAAATGCGTATGTTCTTCTTCATAGTTTCAATGTTAATAACAGTGATAAGCCAATCCTCAAGGAGTACCTCATCAATGCAAATGAATCACCACTCACTTTGTTCTTCATTCCCTTGAAGAACTCAGCTGCGTTCGTCAATGCCATTGAAGTTGTTTCAGCTCCTGATAACCTGATCTTTGACACTGGTGCTGCCCTTTTCCCCGTTGGTGACTTTTCTGGCCTGACAAGTTATGGTATCCAACCTGTTTATAGGCTCAACAATGGAGGACCCTTGATCACCTCATCAAATGACACCCTTGGAAGAATTTGGGAATCTGATGAGCCTTTCCTCACAAACAAGAACTTGGCAAAGAGTGTCTCAATCGCCACAAACGCTATTAAGTTCCCTACTGACACACCAACAATTTCTCCTCTGGTTGCACCACAATCTGTGTATGCTTCTGCTACTGAGATGGGTGATGCTGGTGTTAATCAGCCAAATTTCAATGTTTCATGGAAATTTGACGTGGACACTTCTTTTAGTTATCTTGTTAGGTTGCATTTCTGTGACATTGTCAGCACAGGGCTTAATGAACTCTACTTTAATGTCTATATCAATGGGAAAATGGCAATTTCTAACCTGGATTTATCAGCTATTACCGGCGCCTTATCAACACCATATTACAAAGACATTGTGGTGAACGCAACATTGATGTCTGAGGGACTATCAGTTCAGGTTGGGCCAGCAAAGGCTGAGGGTGGTAATGCCAATGCCATTGTGAATGGTATAGAGATAATGAAGTTGAGCAACTCAGTGAACAGTTTGGATGGAGAATTTGGTGTTGATGGAAGAAAAGTCGGTGGCTCTAACCGTGGGACGGTTGCGGCTGTTGGGTTTGCCATGATGTTTGGAGCATTTGTTGGTCTTGGTGCTATGGTGGTCAAGTGGCATAAGAGGCCTCAGGATTGGCAAAAGAGGAATAGCTTCTCTTCATGGTTACTTCCTCTACATGCTGGTGATACGAGCTTTACAGGCAGCAAAAGTAACATGTACTCCTCAACTATGGGGTTAGGAAGGTTTTTTTCATTTGCGGAATTGCAGGAAGCAACCAAGAACTTTGATTCCAAGGCCATTATTGGTGTTGGTGGATTTGGTAATGTGTATTTGGGTGTGATTGATGAGGGGACTAAAGTGGCAGTGAAGAGAGGAAATCCACAATCAGAACAAGGCATAACAGAATTCCAGACAGAGATTCAAATGTTGTCCAAGCTTAGACACAGGCATTTGGTGTCCTTGATTGGATATTGTGATGAGAATGAAGAAATGATCCTGGTTTATGAGTACATGCCTAATGGACATTTCAGAGACCATCTTTATGGAAAAAACTTGCCTGTTCTTTCTTGGAAGCAAAGGTTAGAGGTCTGCATCGGGTCAGCTCGTGGCCTTCACTACCTTCACACTGGCACAGCACAAGGTATCATTCATCGCGATGTCAAGACGACCAACATTTTGATTGATGAAAACTTCACAGCCAAGGTATCTGATTTCGGACTTTCAAAGGATGCACCTATGGGCCAGGGTCATGTTAGCACAGCAGTGAAGGGTAGCTTTGGTTATCTGGACCCTGAGTACTTCCGGAGACAACAATTGACTGAAAAGTCTGATGTGTACTCATTTGGTGTTGTCCTTCTCGAGGCACTTTGTGCAAGGCCAGCAATCAACCCTCAGTTGCCCCGCGAACAAGTAAACTTGGCTGACTGGGCGATGCAGTGGAAGAGGAAGGGCTTGCTTGACAAGATCATTGACCCTCTTCTTGTTGGCAACATCAATCCAGAATCAATGAAGAAGTTTGCTGAGGCTGCTGAGAAGTGTTTGGCTGATTATGGAGTTGATAGGCCTTCAATGGGAGATGTGTTATGGAACTTGGAGTATGCATTGCAGCTTCAAGAAGCTTTCACACAAGGAAAAGCTGAAGATGAGAATGAGGCCAAGCCTGCGCCTGCTTCTTCGACACCTTCCACCAACTTGGATGACCCTGACACACCACCACCGGTGGATACTCATATTCCACAACCAGTAGTAAACAACGACCATCCAGCAGAAGCACCACCAGTTATTGATGACCATTCTGGAACTGCAATGTTTGCACAGTTCAGTGATCTTAATGGCAGGTGA 2619 0.4422 MTETHFNSLTDPCDNPVWLTGVITTATVTTTASTTVADLLVSEKMSPLASSSFTPKDNILIDCGAENAPTLPDGRQFKSDPQANSFLQANDDYKVSAGDDPELPSPIYKTARIFIQEAEYSFHLAHPGYHWIRLHFYPVKNDVFDLQKATFSVNTNAYVLLHSFNVNNSDKPILKEYLINANESPLTLFFIPLKNSAAFVNAIEVVSAPDNLIFDTGAALFPVGDFSGLTSYGIQPVYRLNNGGPLITSSNDTLGRIWESDEPFLTNKNLAKSVSIATNAIKFPTDTPTISPLVAPQSVYASATEMGDAGVNQPNFNVSWKFDVDTSFSYLVRLHFCDIVSTGLNELYFNVYINGKMAISNLDLSAITGALSTPYYKDIVVNATLMSEGLSVQVGPAKAEGGNANAIVNGIEIMKLSNSVNSLDGEFGVDGRKVGGSNRGTVAAVGFAMMFGAFVGLGAMVVKWHKRPQDWQKRNSFSSWLLPLHAGDTSFTGSKSNMYSSTMGLGRFFSFAELQEATKNFDSKAIIGVGGFGNVYLGVIDEGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENEEMILVYEYMPNGHFRDHLYGKNLPVLSWKQRLEVCIGSARGLHYLHTGTAQGIIHRDVKTTNILIDENFTAKVSDFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPQLPREQVNLADWAMQWKRKGLLDKIIDPLLVGNINPESMKKFAEAAEKCLADYGVDRPSMGDVLWNLEYALQLQEAFTQGKAEDENEAKPAPASSTPSTNLDDPDTPPPVDTHIPQPVVNNDHPAEAPPVIDDHSGTAMFAQFSDLNGR 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0770 872 CDD STKc_IRAK 527 791 - -
Lal2g0770 872 Pfam Protein tyrosine and serine/threonine kinase 525 717 IPR001245 GO:0004672|GO:0006468
Lal2g0770 872 SUPERFAMILY Protein kinase-like (PK-like) 505 788 IPR011009 -
Lal2g0770 872 MobiDBLite consensus disorder prediction 801 859 - -
Lal2g0770 872 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Lal2g0770 872 Gene3D Phosphorylase Kinase; domain 1 489 596 - -
Lal2g0770 872 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Lal2g0770 872 Gene3D Transferase(Phosphotransferase) domain 1 597 815 - -
Lal2g0770 872 Pfam Malectin-like domain 61 415 IPR024788 -
Lal2g0770 872 ProSiteProfiles Protein kinase domain profile. 521 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0770 872 SMART serkin_6 521 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0770 872 PANTHER OS07G0166700 PROTEIN 43 851 IPR045272 GO:0004714|GO:0006468
Lal2g0770 872 PANTHER BNAC03G60370D PROTEIN 43 851 - -
Lal2g0770 872 Gene3D - 58 209 - -
Lal2g0770 872 Gene3D - 234 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0770 Lal-Chr2 4941843 4945481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0770 51 872 Receptor kinase-like Gene Family AT4G39110 67.696 0.0 1175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lal2g0770 Malectin_like 6.2e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0770 - - gmx:100790759 1417.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0707 1 4721868 4724462 Lal2g0770 2 4941843 4945481 LSH
Lal2g0770 2 4941843 4945481 Lal9g0675 9 4647441 4649966 LSH