Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0757 ATGGAGTTTGATCCAAACTCAGCAAACAAATTTCCTTACCTTTCAGGTATTTTCCCAGAAGACCCCAACATAAAGTTAGAGAAACTCATCATTCTTCCACCGCCACAAACCTCTATTCTTGTACCAACTTCACCAAACAACACCAACAATTTCCACCATTTTCAACATTACTATGATCTCCTCAATGGTGCTAACCATCACAATGGTTTTGTGATGGTGGGTCCTTCTTCCTCCACTACCAACTCTTTCTCTATGTTATCAAACCCTTCTTCTTCTTCTTCTTCAGGTGAGTCTCTGAGAAACCATGCCAAAATCGAAGATATGCTTGGCTACCTTAACAATGACAAATACCTTGGAGATTTCTCCAAAACAAACCCTATTGAGTGTGGTGTGAGTTCACAACCTCAGATTGGTCTCTCACTTTCCCCACCAGTTGTTTATGCATCAACAACAGGGAATAATACTGAAATTATGCACCATATCACAACTAAAGGGCAGTGGACACAAGATGAAGATAGGGTTCTGATCCAATTGGTAAAATATTTTGGTCCTGGAAAATGGTCTCGTATCGCTGAGTTAATGAAAGGGCGGGTCGGAAAACAATGCAGATATAGATGGAACAATCATCTTCAGCCAAACATTAAGAAGGACCCATGGAGTAATGAGGAAGATAAAATACTTATAGAAGCTCACAAGGAAGTTGGGAACAAGTGGATAGAAATTGCAAAGAGATTGCCTGGTCGAACTGAGAATACTATTAAGAATCATTGGAATGTCATAAAGAGGCGCAAGAATAATGCAAAGAAGAAAAGTCACAAGACCACTTATTCAAATGGAACACTTCTTCATAACTACATCATGCAAGTTACTAAAGGTGGAGCTGATAAAGAGTTGAACAAAACCATGAGCAATAATAATATGACCTTAAAGAATGAGAATTGCAATGATGTAGGTGTCCTCTCAAAGGGTGAGTTCAGTAGTAAGGATTGGAGGACTATGGTTTATGATCATCAGCAGAGTTATGAAGTTGGTTGGAATTTGCAATAG 1047 0.3897 MEFDPNSANKFPYLSGIFPEDPNIKLEKLIILPPPQTSILVPTSPNNTNNFHHFQHYYDLLNGANHHNGFVMVGPSSSTTNSFSMLSNPSSSSSSGESLRNHAKIEDMLGYLNNDKYLGDFSKTNPIECGVSSQPQIGLSLSPPVVYASTTGNNTEIMHHITTKGQWTQDEDRVLIQLVKYFGPGKWSRIAELMKGRVGKQCRYRWNNHLQPNIKKDPWSNEEDKILIEAHKEVGNKWIEIAKRLPGRTENTIKNHWNVIKRRKNNAKKKSHKTTYSNGTLLHNYIMQVTKGGADKELNKTMSNNNMTLKNENCNDVGVLSKGEFSSKDWRTMVYDHQQSYEVGWNLQ 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0757 348 Gene3D - 163 215 - -
Lal2g0757 348 SUPERFAMILY Homeodomain-like 164 257 IPR009057 -
Lal2g0757 348 ProSiteProfiles Myb-like domain profile. 164 210 IPR001005 -
Lal2g0757 348 Gene3D - 217 280 - -
Lal2g0757 348 CDD SANT 218 258 IPR001005 -
Lal2g0757 348 CDD SANT 167 210 IPR001005 -
Lal2g0757 348 PANTHER MYB PROTEIN-RELATED 147 308 - -
Lal2g0757 348 SMART sant 163 212 IPR001005 -
Lal2g0757 348 SMART sant 215 263 IPR001005 -
Lal2g0757 348 Pfam Myb-like DNA-binding domain 167 225 - -
Lal2g0757 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 215 265 IPR017930 -
Lal2g0757 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 159 214 IPR017930 -
Lal2g0757 348 ProSiteProfiles Myb-like domain profile. 211 261 IPR001005 -
Lal2g0757 348 PANTHER MYB DOMAIN PROTEIN 100-RELATED 147 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0757 Lal-Chr2 4858307 4860607 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0757 163 293 MYB Transcription Factor Family AT4G18770 60.305 4.88e-52 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal2g0757 Myb_DNA-bind_6 1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0757 K09422 - lang:109354158 240.35