Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0750 ATGGTGAACACATATAACCCATATAATGATGGAGTGACATTGCTTCACTTTAAACAAGCACCAGCGGCAGGTATATTTGGAGACAAATGTGTATTTTATAAGTGTAGTTTCATGGGTTTTCAAGACACTTTGTTGGATTCAAATGGAAAACATTATTTTAAAGATTGCTACATTCAAGGTGAAGTGGATTTTATTTTTGGGAGTGGCCAGTCCTATTATGAGGATTGTGTGGTTAATGCCACAGGGTGGAATAATTTTACAGGTTTCATTACTGCCCAAGGTCGAAAGTCAGAGGATGACCCAAGTGGTTTTATATTTAAAGGAGGTTCTGTTGTTGGGATTGGTCATGCATATTTAGGAAGAGCTTATGGTCCTTACTCTAGAGTTATATTTAATGAAACTTACTTTTCTTCCGTGGTAGCCCTTGAAGGATGGAATTCGTGGAATTTTAAGAATCATGAGTCTAACTTTACCTATGCTGAGGTTGAATGTAAAGGGCCAGGAAGTGATAGAAGGCAGCGTGTCCCTTGGATGAAGAATCTCACTAATTCACAATTAGAACAATTTTCTTTTTCATCTTTTATTAATAAGGATAATTGGCTTTCCGATTTACCTGTTAGTCTTTCGTAA 630 0.3667 MVNTYNPYNDGVTLLHFKQAPAAGIFGDKCVFYKCSFMGFQDTLLDSNGKHYFKDCYIQGEVDFIFGSGQSYYEDCVVNATGWNNFTGFITAQGRKSEDDPSGFIFKGGSVVGIGHAYLGRAYGPYSRVIFNETYFSSVVALEGWNSWNFKNHESNFTYAEVECKGPGSDRRQRVPWMKNLTNSQLEQFSFSSFINKDNWLSDLPVSLS 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0750 209 Pfam Pectinesterase 18 197 IPR000070 GO:0030599|GO:0042545
Lal2g0750 209 SUPERFAMILY Pectin lyase-like 4 204 IPR011050 -
Lal2g0750 209 Gene3D - 1 209 IPR012334 -
Lal2g0750 209 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 9 207 - -
Lal2g0750 209 PANTHER PECTINESTERASE 9 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0750 Lal-Chr2 4739389 4740585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0750 19 204 Carbohydrate Esterase AT1G05310 45.361 3.62e-54 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0750 - - gmx:100803932 267.7