Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0744 ATGAACATGTTAGGCCTAAGAGACCTAGTTCTCATAGCTCCCAACCCTTCTTCATTGAACCACCAACAAGGCCAACAACAACACCAACACATATCAGGTGAACACCATGGCAACATTCCTTTGAATTCCTCAGCTGCTCTCAGTGTTGGCCTTGGCATTTTTCCACTCTTAACTATACCACAACCACAACAACCTCATATCAATGATGTTCATCAAGATTGTGGTGGTAGCAACAACAACAACAACAACTATTGGAACCTTAAGATGTGTCCAGAAGTGATGAATAACTCAGCTAGAAAAGGAGTTATGATCAACATGGAAGAAAATGAAAGCAACAAGCACATGCTTGAGGGTGAAGAAAATGGAGATAATATCTATGGTGGGGGTGAGTTCAGGGTGTGTCAAGATTGTGGTAACAGAGCTAAGAAAGATTGCAACTTTAGAAGATGCAGGACTTGTTGCAAGGGACGTGGATATGATTGCAGCACTCATGTGAAGAGTACATGGGTTCCAGCATCTCGGAGGAGGGACCGGGATATGGTGGTGGCTGGTGGTGGTGATGATGGTGGTGCTGGTGCTTCTTCTTCTGGTGCTAAGAGGCTAAGAGCTTTAGGGTCATCATCACAAAATGCTGCTACTAATTCTCATAGTTCTACTTCTAATGCTACCACAACAAAGAGCTTTGATACTAGCTCTTATCATCAAGATTCTGGTTTCAAACAATCTTTACCAGGTCATGTATGTGCACCTGCTGTGTTTAGGTGCCATAGAATGGCTGCTATTGGCAATGGTGAAGATGAACTTGCCTACTTAGCCACTGTCCAAATTAGAGGCCATGTTTTCAGGGGCTTTTTGTATGATCATGGTGTTGATGGGAAGAATGAGACTCCTTATGTTTCTGTATTGCAACTTGGAAACAATGGTAGTGGAAAGAATAATAGGGAATGTTCTTCTTCTGCAATTGGTGTTCCAACTAGTGCCTACCCTGCTTCTGCATGTTGA 1002 0.4291 MNMLGLRDLVLIAPNPSSLNHQQGQQQHQHISGEHHGNIPLNSSAALSVGLGIFPLLTIPQPQQPHINDVHQDCGGSNNNNNNYWNLKMCPEVMNNSARKGVMINMEENESNKHMLEGEENGDNIYGGGEFRVCQDCGNRAKKDCNFRRCRTCCKGRGYDCSTHVKSTWVPASRRRDRDMVVAGGGDDGGAGASSSGAKRLRALGSSSQNAATNSHSSTSNATTTKSFDTSSYHQDSGFKQSLPGHVCAPAVFRCHRMAAIGNGEDELAYLATVQIRGHVFRGFLYDHGVDGKNETPYVSVLQLGNNGSGKNNRECSSSAIGVPTSAYPASAC 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0744 333 MobiDBLite consensus disorder prediction 176 235 - -
Lal2g0744 333 MobiDBLite consensus disorder prediction 200 235 - -
Lal2g0744 333 PANTHER LRP1 CARBOXY-TERMINAL DOMAIN PROTEIN 2 333 - -
Lal2g0744 333 MobiDBLite consensus disorder prediction 16 38 - -
Lal2g0744 333 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 2 333 IPR007818 GO:0003700|GO:0006355
Lal2g0744 333 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 133 175 IPR006510 -
Lal2g0744 333 Pfam Domain of unknown function (DUF702) 133 291 - -
Lal2g0744 333 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 243 290 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0744 Lal-Chr2 4698966 4702383 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0744 1 328 C2H2 Transcription Factor Family AT5G12330 40.181 9.14e-58 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lal2g0744 DUF702 4.2e-53 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0744 - - gmx:100777812 409.453