Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0740 ATGAGGAAGAAGCTTGATACCCGTTTCCCTGCTGCTAGGATTAAGAAGATAATGCAAGCAGATGAGGATGTTGGAAAGATAGCCCTGGCAGTGCCTGTTTTAGTTTCTAAAGCTCTGGAACTATTTTTGCAAGATCTTTGTGATCGTACTTATGAAATAACTCTTCAGAGAGGAGCCAAGACCATGAATTCATTGCATCTAAAACACTGTGTACAAAGCTATAACGTCTTTGACTTTCTAAGGGATGTTGTCAGTAGGGTTCCTGACTACAGCCATGGCCATTCTGAGGCTGGTGCTGATGATCGGGCCATTTCAAAACGAAGGAAAGCTGCTGCCGAAGATGGTAATGACAGTGATGAAGAAGCTAAGAGAGGCAAGATGCGCGAGTTAAGCCACAGTGGCAGTACTGGTAGAGGAAGAGGCCGAGGTAGAGGAAGAGGGCGTGGTCGAGGAGCTCGAACTGTAGAAAGAGAGACACATCATCAGGAAGCTGAACCTGAGCCTTGTACTATCGTTCAGCATGGAAGCGAACATAATACCGACACAATCATGACAACGCATGAGGATGGTTCAGAGTCGAAGGAGTTATTGAAGGAGAACATTTCAGTTCCTGTTGAAAACAATGAGTCATTCCAAAACATTGATCTGAATGCCAACATGAACGAAAACGAGGACAAAAGTGCTAGCACAGCAGTTAATGCCTCATTGTCTGAACCTGCAATAGAGATCAAACATGAAGAAATTCCAGGGTGGTCCCTTTCTGATGTGAGCAAGATGGCCATTGATACTATGCAGCTTGCGCACCTTGGTCGCGGACTAGAAGATGAAGATGAAGATTATGACGAGGAAGGATAA 855 0.448 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYNVFDFLRDVVSRVPDYSHGHSEAGADDRAISKRRKAAAEDGNDSDEEAKRGKMRELSHSGSTGRGRGRGRGRGRGRGARTVERETHHQEAEPEPCTIVQHGSEHNTDTIMTTHEDGSESKELLKENISVPVENNESFQNIDLNANMNENEDKSASTAVNASLSEPAIEIKHEEIPGWSLSDVSKMAIDTMQLAHLGRGLEDEDEDYDEEG 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0740 284 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 283 - -
Lal2g0740 284 MobiDBLite consensus disorder prediction 89 135 - -
Lal2g0740 284 SUPERFAMILY Histone-fold 4 90 IPR009072 GO:0046982
Lal2g0740 284 MobiDBLite consensus disorder prediction 149 167 - -
Lal2g0740 284 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Lal2g0740 284 PANTHER HISTONE SUPERFAMILY PROTEIN 1 283 - -
Lal2g0740 284 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Lal2g0740 284 MobiDBLite consensus disorder prediction 89 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0740 Lal-Chr2 4672391 4675981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0740 1 271 CCAAT-HAP5 Transcription Factor Family AT3G12480 50.694 1.34e-76 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lal2g0740 CBFD_NFYB_HMF 2.1e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0740 K21752 - gmx:100814712 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0740 2 4672391 4675981 Lal2g0740 2 4672391 4675981 ECH