Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0732 ATGTTAACACCTTCACTCTCATTCCTTCTTCTCTCCCTCTTTGTACCATTACTCCTAGCTCAACCTCCAACCCTTCCTCCTTCTCCCTCTTCAGTATGCAAATCCACACTCTATCCAAAACTATGTCGTTCCATTATCTCATCCATTGGTTCCTCTCCTTCTGATCCATACCACTTAGGCAAATTCTCCATCAAACAAAGCCTCAAACAAGCCAAGAAACTAGCCAAAGTGTTTCAAGACTTCCTCAAAAAGAAGCATAACTCTTCTTCTCTTAACCATGCAGAGGTTGCAGCACTTGATGACTGCAGTGAACTCAACCACCTCAACGTGGATTACTTAGAATCTGTGTCAGAAGCGCTTAAATCTGCTGATTATAATTCTTCATCAAACCAAGAGTTGGTGGAAACTATTGAAACCTATCTAAGTGCTGTGGCCACTAACCATTACACTTGCTATGATGGGTTGGTTGTGACTAAGAGTGAAATAGCCAATGCACTTGCTGTGCCTCTCTCCAATGTAACACAACTATATAGTGTGTCGCTTGGATTGGTTGCACAGTCTCTGAACAGAAACCTCAAGAAACATAAGACCAGTAAACATAGTCTTCCCACCAAGGATTTCAAGGTCAGGCTGCCACTTGAAAAGCTCATCAAGACTGTTCGCAAAGAGTTTCATTGCAAAAAATCATCCAATTGTACTAGAAGTGAAAGGATTCTGAAACCAAGTGAAAGCAAAGGAATATTGCTGAATAACTTTGTTGTTGTGAGTCTTGATGGAACACACAACTTCACTTCCATTGAAGAAGCTGTTTCTGCTGCACCTAATGACACAAAACCAGAAGATGGTTATTTCCTCATCTATGTCACAGAAGGATACTATAATGAATATGTCATTATTCCCAAACACAAGAAGAATATCTTGCTTGTAGGAGATGGTATCAACAACACTGTCATCACAGGGAATCATAGTGTTATAGATGGCTGGACAACTTTCAATTCTTCAACCTTTGCTGTTTCTGGAGACAATTTCATTGGTGTGGATGTAACATTCAGAAACACAGCAGGTCCTGAAAAGCACCAAGCAGTAGCTGTGAGGAACAATGCAGACCTCTCTGTCTTCTACCGTTGTAGTTTTGAAGGATACCAAGACACTCTCTATGTTCACTCACTTAGGCAATTCTATAGGGAATGTGATATATATGGCACTGTGGATTTCATTTTTGGCAATGCTGCTGTGGTTTTCCAAAAGTGTAACATATATGCCAGAAAACCATTGCCAAACCAAAAGAATGCTATCACAGCACAAGGGCGAAATGATCCAAACCAAGTAACTGGAATTTCAATACAAAATTGCAAAATTGATGCTGCACCAGATTTGGCAGCAGAGGTAAATTCCACAGAAAACTACTTAGGTAGACCATGGAAACAGTATTCCAGGACTGTGTACTTGCAATCATACATTGGAGATCTGATTCAACCTTTGGGATGGTTAGAGTGGAATGGCACAGTTGGATTAGACACCCTTTTTTATGGTGAGTTCAAAAACCATGGACCAGGTGCTAATACCAACAAAAGGGTACAATGGCATGGTTACAATCTGTTGAATGCTACACAAGCTTGGAACTTTACTGTCCTTAATTTTACCTTGGGGAATACATGGCTGCCCAACACAGATATACCCTATTCTGAAGGTCTACATTAG 1701 0.4051 MLTPSLSFLLLSLFVPLLLAQPPTLPPSPSSVCKSTLYPKLCRSIISSIGSSPSDPYHLGKFSIKQSLKQAKKLAKVFQDFLKKKHNSSSLNHAEVAALDDCSELNHLNVDYLESVSEALKSADYNSSSNQELVETIETYLSAVATNHYTCYDGLVVTKSEIANALAVPLSNVTQLYSVSLGLVAQSLNRNLKKHKTSKHSLPTKDFKVRLPLEKLIKTVRKEFHCKKSSNCTRSERILKPSESKGILLNNFVVVSLDGTHNFTSIEEAVSAAPNDTKPEDGYFLIYVTEGYYNEYVIIPKHKKNILLVGDGINNTVITGNHSVIDGWTTFNSSTFAVSGDNFIGVDVTFRNTAGPEKHQAVAVRNNADLSVFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVFQKCNIYARKPLPNQKNAITAQGRNDPNQVTGISIQNCKIDAAPDLAAEVNSTENYLGRPWKQYSRTVYLQSYIGDLIQPLGWLEWNGTVGLDTLFYGEFKNHGPGANTNKRVQWHGYNLLNATQAWNFTVLNFTLGNTWLPNTDIPYSEGLH 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0732 566 Pfam Pectinesterase 253 550 IPR000070 GO:0030599|GO:0042545
Lal2g0732 566 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 185 IPR035513 -
Lal2g0732 566 TIGRFAM PME_inhib: pectinesterase inhibitor domain 30 185 IPR006501 GO:0004857
Lal2g0732 566 PANTHER PECTINESTERASE 7 565 - -
Lal2g0732 566 CDD PMEI-like_3 32 185 - -
Lal2g0732 566 Gene3D - 251 566 IPR012334 -
Lal2g0732 566 SMART PMEI_2 24 183 IPR006501 GO:0004857
Lal2g0732 566 PANTHER PECTINESTERASE 7 565 - -
Lal2g0732 566 ProSitePatterns Pectinesterase signature 2. 399 408 IPR033131 -
Lal2g0732 566 Pfam Plant invertase/pectin methylesterase inhibitor 30 182 IPR006501 GO:0004857
Lal2g0732 566 SUPERFAMILY Pectin lyase-like 250 564 IPR011050 -
Lal2g0732 566 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 186 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0732 Lal-Chr2 4601303 4604780 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0732 32 565 Carbohydrate Esterase AT3G10720 61.039 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0732 K01051 - gmx:100808277 862.448