Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0728 ATGGATGTTGTAGCAGTAGATGAAGGGGAAAACAGTGATAGAACTGCTTCGGAAAATGTTTTAAATGAAAAAGGCCAGAAACAAGTTATGATTGTAAACTTGGCTGAAAGACAAGTAAATAATCAGGATGGTAATGCATATAGGAAACCACAACTGGGCATGCTGTTTGAATCTGAAGATGCTGCAAAAACATTTTATGATGCATATGCAAGGCATGTTGGATTTAGCATCCATGTCGGTCAATTCAGTCGTACTAAGCCTGATGGTCCAATTATAAGTTGGGACTTTGCATGTTCTAGAGAGGTATTGAAAAGGAAGAATGTAGTAAGTTGCAATGCAATGCTTAGGATAGAGAGAAAAGATGCAAACTGGACAGTGACAAAGTTTGTTGAGGACCATAGTCATTCCCTGGCTTCCTTAAGTAAGGTGCACCACCTTCGACCCCGTAGGCACTTTGCAGGTGCTACAAGGAATGTTATGGAGACATTTGATTCTAGTAATGATATGTATGCTTCCATGGATGACATTCCTTTAGAACCGATTGGTAATGTTAGGAGTTCCTCTCCAGCAGAAAAATGTCACCCAACCCGAAACATCGGACCTTTTACCTGTGTAGGATATTCTCAAAAGAGAACCCTTGGAAGAGATACTCACACTCTTCTGAATTATTTTCAGAAGATGCAAGCAGAAAACCCTGGCTTCTATTATGCAATACAGCTTGATGATGAGAACCGCATGACAAACGTATTCTGGGCTGATGCAAGGTCGAGAACAGCTTATAATTACTTTGGTGATGCAGTAATTTTTGACACGATGTATAGACCAAATCAATATCAGGTCCCATTTGCTCCCTTTACAGGAGTCAATCATCATGGTCAGATGGTTTTATTTGGTTGTGCATTAGTTTTGGACGAATCTGAGTCATCCTTTACTTGGCTGTTCAGGACATGGCTATCTGCTATGAATAATCGACCACCTGGTTCTATAACCACCGACCAAGATCGAGCAATACAAGTAGCTGTTACCCAGGTGTTTCCAGAAACTAGACACCGTATTTGTAAGTGGCACATTTTGAGAGAGGGTCAAGAACGTTTGGCTCATATTTACCTTGCTCATCCTTCATTCTACGGGGAGCTATATAGCTGCATCAGTTTCTCTGAGAGTATAGAAGATTTCGAATGCATGTGGAAGTCTCTCTTAGATAAATATGATCTCCAAAAAAATGATTGGCTTCAGGCAGTGTATAATGCTCGCAAACAATGGGCCCCTGTTTACTTTCATGGTACTTTCTTTGCTTCACTTACTCCAAGTCATGGGATTAGCTCCTTTTTTGATGGCTATGTAAATCAACAGACATCCCTACCTTTATTTTTTAAGCAGTATGAAAGAGCTCTTGAACATTCATTGGAAAAAGAAATAGAAGCAGATAACGATACCATTTGTACAACACCTGAATTGAAGACTCCATCGCCAATGGAACAGCAGGCTGCAAATTTGTACACTAAGAAGATTTTTACAAAGTTTCAGGAGGAACTTGTGGAAACTTTTGTATATACTGCAAATATTGTTGAGGATGATGGTGTGGTCAGTAAATACAGGGTTGCAAAATATGAACACGATCACGAGGCATTCATGGTCTCATTAGATATTTCTGAAATGAAGGCGAAATGCAGCTGTCAGATGTTTGAGTACTTAGGCATTCTTTGTCGCCATATATTGACTGTCTACACTGTTACAAACGTTCTTACTCTTCCACCGCACTACATTTTGAAACGGTGGACAAGGAATGCGAAATCCAATTTTGGGACAGATGAAAGAATACCAGATCCACTTGGCATTGAAAGACTCACATTACGTTTTAATAGTTTATGTCGAGAAGCAATTAAGCTTGCAGAAGAAGGGTCAATAGCTGTAGAGACTTATAACACTGCAATGAATGCTTTAAGAGAGGTTGGTAAAAAGGTTACTGTTGTGAAGAAAAATGTTGCAAAAGTCACACCTTCAAGGACTCAGGGTGATGGAAGCAGTCAGCAAGACACCAGCAAGATGAGTCCATCAATTTCTGACATCATCCCATCATTATGGCCTTCGCAAGATTCAGTGACGCAACACTTTAATCTTAATGATATTGGCCTTCCTGTTACTGATTTGAATCATCCTACTATGGCTCCTATTTCCATTCACCGGGATGGTGGCCCTCTAGATAACACAGTTGTCCTTACTTGTTTCAAGTCTATGACTTGGGTTATAGAAAATAAGAATTCAAGCCCATCCAGTAAAGTCGCAGTGATCAACATGAAGCTGCAAGATTACGGTAAGAGTCCTTCTGGGGAGAGAGAAGTGCAATTCAGGGTGACGAGGCTCACTTTGGAGCCTATGTTGAGATCTATGGCTCACATCAGCCAGCAGCTCGCGGTACCAGTCAATAGAGTTGCTGTTATCAATCTAAAGCTCCAGGATACAAAGACAAGTACTGGGGAAACAGAGGTGAAATTCCAAGTTTCTAAAGATACGCTAAGTTCCATGCTGAGATCTTTGAACTACATCCGGGAGCAGCTATAA 2562 0.4055 MDVVAVDEGENSDRTASENVLNEKGQKQVMIVNLAERQVNNQDGNAYRKPQLGMLFESEDAAKTFYDAYARHVGFSIHVGQFSRTKPDGPIISWDFACSREVLKRKNVVSCNAMLRIERKDANWTVTKFVEDHSHSLASLSKVHHLRPRRHFAGATRNVMETFDSSNDMYASMDDIPLEPIGNVRSSSPAEKCHPTRNIGPFTCVGYSQKRTLGRDTHTLLNYFQKMQAENPGFYYAIQLDDENRMTNVFWADARSRTAYNYFGDAVIFDTMYRPNQYQVPFAPFTGVNHHGQMVLFGCALVLDESESSFTWLFRTWLSAMNNRPPGSITTDQDRAIQVAVTQVFPETRHRICKWHILREGQERLAHIYLAHPSFYGELYSCISFSESIEDFECMWKSLLDKYDLQKNDWLQAVYNARKQWAPVYFHGTFFASLTPSHGISSFFDGYVNQQTSLPLFFKQYERALEHSLEKEIEADNDTICTTPELKTPSPMEQQAANLYTKKIFTKFQEELVETFVYTANIVEDDGVVSKYRVAKYEHDHEAFMVSLDISEMKAKCSCQMFEYLGILCRHILTVYTVTNVLTLPPHYILKRWTRNAKSNFGTDERIPDPLGIERLTLRFNSLCREAIKLAEEGSIAVETYNTAMNALREVGKKVTVVKKNVAKVTPSRTQGDGSSQQDTSKMSPSISDIIPSLWPSQDSVTQHFNLNDIGLPVTDLNHPTMAPISIHRDGGPLDNTVVLTCFKSMTWVIENKNSSPSSKVAVINMKLQDYGKSPSGEREVQFRVTRLTLEPMLRSMAHISQQLAVPVNRVAVINLKLQDTKTSTGETEVKFQVSKDTLSSMLRSLNYIREQL 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0728 853 SMART 26again6 555 582 IPR006564 GO:0008270
Lal2g0728 853 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 35 797 IPR031052 GO:0006355
Lal2g0728 853 Pfam SWIM zinc finger 546 577 IPR007527 GO:0008270
Lal2g0728 853 Pfam FAR1 DNA-binding domain 64 138 IPR004330 -
Lal2g0728 853 Pfam MULE transposase domain 267 359 IPR018289 -
Lal2g0728 853 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 35 797 - -
Lal2g0728 853 MobiDBLite consensus disorder prediction 665 685 - -
Lal2g0728 853 ProSiteProfiles Zinc finger SWIM-type profile. 544 580 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0728 Lal-Chr2 4569383 4574860 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal2g0728 MULE 6.3e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0728 - - gmx:100789242 1408.28