Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0710 ATGGGTTCTTCTAATACGAACACGAACACGAGTGTGGAGTGGCACGTGCGTCCTCCAAACCCTAAGAACCCAATCGTGTTCTTCGATGTCACCATCGGCAACATCCCTGCTGGTCGAATCAAGATGGAACTCTTCGCTGATATTGCTCCCAAAACCGCTGACAATTTCAGGCAGTTCTGCACAGGGGAGTACAGGAAAGCGGGACTACCCGTCGGTTACAAGGGTTGTCAATTTCACAGGGTGATTAAGGATTTTATGATTCAGGCTGGTGATTTTGTAAAGGGTGATGGTAGTGGATGTGTTTCCATCTATGGGCACAAGTTTGATGATGAAAATTTTATTGCCAAGCACACTGGTCCTGGTCTTCTATCGATGGCAAATAGTGGACTAGATACTAATGGTTGTCAGTTTTTCATCACCTGTGCAAAATGTGACTGGCTTGACAACAAGCATGTTGTTTTTGGGAGAGTGCTTGGAGATGGTCTTTTGGTTGTCAGAAAGATTGAGAATGTGGCAACTGGACCCAATAATCGGCCAAAATTAGCTTGCATAATTGCTGAATGCGGTGAAATGTAA 576 0.4479 MGSSNTNTNTSVEWHVRPPNPKNPIVFFDVTIGNIPAGRIKMELFADIAPKTADNFRQFCTGEYRKAGLPVGYKGCQFHRVIKDFMIQAGDFVKGDGSGCVSIYGHKFDDENFIAKHTGPGLLSMANSGLDTNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACIIAECGEM 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0710 191 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 20 191 - -
Lal2g0710 191 SUPERFAMILY Cyclophilin-like 14 191 IPR029000 -
Lal2g0710 191 Gene3D - 12 191 IPR029000 -
Lal2g0710 191 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 44 59 IPR002130 GO:0000413|GO:0003755
Lal2g0710 191 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 78 90 IPR002130 GO:0000413|GO:0003755
Lal2g0710 191 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 121 136 IPR002130 GO:0000413|GO:0003755
Lal2g0710 191 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 136 148 IPR002130 GO:0000413|GO:0003755
Lal2g0710 191 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 149 164 IPR002130 GO:0000413|GO:0003755
Lal2g0710 191 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 28 189 IPR002130 GO:0000413|GO:0003755
Lal2g0710 191 CDD cyclophilin_ABH_like 24 189 - -
Lal2g0710 191 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE H 20 191 - -
Lal2g0710 191 PIRSF Peptidylpro_ismrse 6 191 IPR024936 GO:0003755
Lal2g0710 191 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 27 190 IPR002130 GO:0000413|GO:0003755
Lal2g0710 191 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 73 90 IPR020892 GO:0003755|GO:0006457
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0710 Lal-Chr2 4369400 4372315 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0710 20 188 U-box Gene Family AT5G67530 41.520 2.81e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0710 K09567 - zju:107428673 380.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0710 2 4369400 4372315 Lal2g0710 2 4369400 4372315 ECH