Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0689 ATGGATCAAGAGCAAGGAGGAGGGGAGTGCCAAAATCAAGAGTCAGTACTTGATGAGATGATTGAATTATGCTCTTCTGATGCTGCTACCAATGCTCCTCATTGTTTGCCTTCTTCAGAGGTTGATGAGTTTGTTGATAGCTTCATCAACATGGATCAGTATCACTATGACAATGAAGATCAAGTGTCCCTAGAAAAGCATCACAATTTTGATCACTTTCTGGTGAATGATGAAGGTGACACTGATGCATACAACAAGAAGATGATGAATGATGCCCTTGGATACGTTGCGACCGCGATGGAGGGTGAAGAATTGGAGATCTATGATAACATCACAATTGCAATGGATGAGGGAGAGGTTGAAATGCCTTGTGTGGAAGAGGCAAGCCTTGGTATAGACAAAGGGTTAGACTTGGTTCACATGCTGTTGGCTTGTGCAGAGGCTGTGAGCTGCAGAGACATTCAGCAAGCAGAGTTGTTGCTTGGAAAATTATGGGCATTGGCTACTCCTTCAGGAGATTCATTGCAGAGAGTCTCGTACTTTTTCGCGGTAGGATTGAAGTGTAGGTTATCACTTTTTTCTCATAATGTCTTTACAAATGGTTCACTCACAACAAGTACTATTGCCATGGATGTCCCTTTGATCTCTAGGGAGGATAAATTGGAAGCTTTTCAGCTTCTTTACCAAGCCACACCCTACATGGCTTTTGGTTTCATGGCTGCTAATGAAACTATATGCCAAGCATCACAAGGAAAGAGCTCCATACACATCATTGATATAGGATTGGAGCATACCCTTCAGTGGCCTTCCCTTATAAGAGTCCTTGCTTCAAGGCCTGAGGGGCCTCCGAAGCTCCGGATAACCGGATTAATCGGCAATGAAGACAATCCAAAGCTTCAATTTAGCATCAATGTGCTAGTGGAGGAAGCAAGGTCATTGGGAATACCTCTTGAATTCCACATAATATCAGAGCCTGCAACTCCATCTCTTCTTACTAAGGAGAAGCTGAACTTGAGAGAAGATGAAGCTTTATTTGTTAACAGTATCTTGCAGTTGCACAAATATGTCAAAGAAAGTAGATCCTATCTGAAGACAATTCTTCAATCAATAAAGAAGTTAGGTCCAACTGCAGTTATAGTGGTAGAACAAGACACCAACCATAATGGACCATTCTTCCTTGGGAGATTTTTGGAGTCACTGCACTATTACTCAGCCATATTTGACTCTCTTGAGGCAAGTATGCCAAGAAATAGCCAACATAGGATGAAGATAGAGAAGTTACACTTTGCTGAAGAAATTCTTAACATTGTAGCTTATGATGGTCCAGACAGAATGGAAAGACATGAAAGGGTAGAACAGTGGAGAAGACAACTAGGAAGAGCAGGATTTCAGGTAATGCCACTCAAGTGCACAAGTCAAGTTAAAATGATGCTTTCTGTTTATAACTGTGATGGATATACATTGTCCTGTGAGAAGGGTACCCTTCTACTTGGGTGGAAAGGAAGGCCAATATTGATGGCTTCTGCATGGAAAGTGGCAAATTTGTGA 1548 0.4186 MDQEQGGGECQNQESVLDEMIELCSSDAATNAPHCLPSSEVDEFVDSFINMDQYHYDNEDQVSLEKHHNFDHFLVNDEGDTDAYNKKMMNDALGYVATAMEGEELEIYDNITIAMDEGEVEMPCVEEASLGIDKGLDLVHMLLACAEAVSCRDIQQAELLLGKLWALATPSGDSLQRVSYFFAVGLKCRLSLFSHNVFTNGSLTTSTIAMDVPLISREDKLEAFQLLYQATPYMAFGFMAANETICQASQGKSSIHIIDIGLEHTLQWPSLIRVLASRPEGPPKLRITGLIGNEDNPKLQFSINVLVEEARSLGIPLEFHIISEPATPSLLTKEKLNLREDEALFVNSILQLHKYVKESRSYLKTILQSIKKLGPTAVIVVEQDTNHNGPFFLGRFLESLHYYSAIFDSLEASMPRNSQHRMKIEKLHFAEEILNIVAYDGPDRMERHERVEQWRRQLGRAGFQVMPLKCTSQVKMMLSVYNCDGYTLSCEKGTLLLGWKGRPILMASAWKVANL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0689 515 Pfam GRAS domain family 138 511 IPR005202 -
Lal2g0689 515 ProSiteProfiles GRAS family profile. 129 511 IPR005202 -
Lal2g0689 515 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 513 IPR005202 -
Lal2g0689 515 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 2 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0689 Lal-Chr2 4206652 4208199 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0689 133 513 GRAS Transcription Factor Family AT3G03450 37.629 3.32e-76 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal2g0689 GRAS 3.1e-108 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0689 - - gmx:100814931 768.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0689 2 4206652 4208199 Lal2g0689 2 4206652 4208199 ECH