Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0688 ATGGCACTCAGCACTTACTTCAACATGGACTTGGACTTTCATCAAACTCCTAACTCATCAGAAATAATCAGCACAATTGCACCACCAGAACAATGCTGTCATCTTTATCAAGATGAGAGTTTCTTCCTTCCAAACACTTTCATTGATCCCTATTTTGACCCAACGAGTTTTCTTTACCCAGAAATCTACCCTCACCTCCTTCCTTATGACCCTATCATTTCACTCTCTGATATCTTCCCTAATGAAGAAAATCATTGCAACCTCCTTCCATGCCCAAAACGCCAAAAATGCTTCTATGAAGAACAAGATCACTCTTCAAACAACAATTTCATTGTGCCAAATGATCCCTTGCCAGAAGAGGAACTGCTACTACCACTACCACTACCAGAACTACCAGAACTACCGGAACAACACTTCATTGATGCAATGCCAGAGTTTCAAGTTCCACAATATAACTTTGGGGCATTTGATGCTGGTTATGAGAATGAGTATGAGAGGAAAAGTAAGGAGAAAAGGACCATATCAGCACAAAGCATAGCGGCAAGAGAAAGGAGAAGGAAGATCACTGATAAGACACAAGAGCTTGGAAAGTTAGTTCCTGGTGGTTCAAGGATGAACACAGCTGAGATGTTGAATGCAGCTGGCAAGTATGTTAACTACTTACAGGCTCAAGTTCAAATGCTTCAACTTATGGACACACTTCAGAAAGATAAGACAGCATGCCCAAGTGAGAATCTGCATGCCCTGCTTGGTTCTCACAGTGTTCAAGAGAAGATGTATTCAGAGGAAAAGTGTCTTGTTCCAAAAGACTTCATTACCACTTTGACAAATCATGCCAATTTTCAATCAAGACCTTCTATCCTTAAAGATCTTATGCAGTTGATTGGGACTGGCAATGAAGAGAAAGCAAAACAAGAATAA 921 0.405 MALSTYFNMDLDFHQTPNSSEIISTIAPPEQCCHLYQDESFFLPNTFIDPYFDPTSFLYPEIYPHLLPYDPIISLSDIFPNEENHCNLLPCPKRQKCFYEEQDHSSNNNFIVPNDPLPEEELLLPLPLPELPELPEQHFIDAMPEFQVPQYNFGAFDAGYENEYERKSKEKRTISAQSIAARERRRKITDKTQELGKLVPGGSRMNTAEMLNAAGKYVNYLQAQVQMLQLMDTLQKDKTACPSENLHALLGSHSVQEKMYSEEKCLVPKDFITTLTNHANFQSRPSILKDLMQLIGTGNEEKAKQE 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0688 306 SMART finulus 178 227 IPR011598 GO:0046983
Lal2g0688 306 Pfam Helix-loop-helix DNA-binding domain 178 222 IPR011598 GO:0046983
Lal2g0688 306 Gene3D - 167 241 IPR036638 GO:0046983
Lal2g0688 306 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 172 221 IPR011598 GO:0046983
Lal2g0688 306 PANTHER TRANSCRIPTION FACTOR BHLH52-RELATED 1 291 - -
Lal2g0688 306 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 169 231 IPR036638 GO:0046983
Lal2g0688 306 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 1 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0688 Lal-Chr2 4202796 4203995 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0688 59 297 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 37.860 1.06e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lal2g0688 HLH 3.7e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0688 - - lang:109363529 398.282