Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0676 ATGGGACAGTGGTATTTATCATCACATATTTTAGCTTTTGCACTTGTTGTTGTTTGTATCTTCAGCTGCTTGATTAACATAGCACAAGCTCAAGCTGCAAACGCCACTACAGATCCCTCTGAAGCGAGAGCGTTGAATGCAATATTCAGCAAATGGGGCATTTCTGCAGACAAAAGACAATGGAATATAAGCGGTGAACTTTGCACTGGAAATGCCATTGATTCCTCTACCACCATTGATGACAGCACTTACAACCCTTTCATCAAATGCGATTGTTCCTTTAGCAATAAAACCACTTGCCACATTACAGCACTGAAGGTTTATGCAATTGATGTGGTCGGTGAAATCCCAGAAGAGCTATGGACTCTAACTTATCTCACCAATTTGAATCTTGGGCAGAATTACTTGACAGGTTCAATACCCGCAGCCATTGGAAATCTAACGCGTATGCAATACTTGTCCATGGGCATTAATTCTTTTTCAGGGGAGCTACCAAAGGAATTGGGAAATCTTACCAACTTAATAGTATTGGGTTTTGGTTCAAACAACTTGTCAGGATCTCTCCCATCTGAACTTGGGAGTCTGGTAAAATTAGAACAAGTCTACCTTGATAGTTCAGGAATTAGCGGTCCAATTCCCTCCACATTTGCAAGTCTCAAGAATCTGGCGACAGTATGGGCTTCAGACATGGAACTCACGGGCAGTATCCCAGACTTCATAGGGAATTGGTCTAAGCTTAAATCCTTGAGGTTTCAGGGTAATTCATTTGGAGGCCCAATACCATCATCATTTTCCAATTTGACTTCTTTGACAGAGTTGAGAATAAGTGAGTTATCTAATGGGAGCTCCTCGTTGGATTTTGTAAGGAATATGAAGTCTTTGACTATATTAGATCTGAGGAATAACAATATATCTGGCTCAATTCCATCTGTCCTTGGAGAATTTCAAAATTTGACTCAGTTGGATTTAAGCTTCAATAATATCACAGGGCAGATTCCAGGATCAATTTTCAATTTGACCTCGCTCTCTCACTTGTTTCTTGGAAATAACAAACTTAGTGGCACTCTCCCTACAGAGATAAGCTCGTCTCTTGCCAATATAGACTTATCGTACAACGATCTATCAGGGAGCTTCCCCTCTTGGGTAAACCAACCAAATTTACAACTCAACTTTGTTGCCAACAACTTCACAGTAAGTTCAAACAGCAGTGGTTTGCCAACTGGGCTCAATTGTCTCCAGAAAAATTTTCCTTGCAATAGTGGTACTGGGAGATATTCTGACTTTGCAATCAAGTGTGGTGGTCCACAAGTTACTGCCGCGGATGGAACTGTGTATGAGAGAGAAAATGCGACACTTGGTCCAGCTACATACTTTGTTACTGATACAAATAGATGGGGTGTTAGTAATGTTGGATGGTTCACTGGGAACAGCAATCCTCTATACAAAAGTTTTGTATCTAATCAGTTCACTGGTACTGTGAACTCAGAGCTCTTCCAAACAGCACGTCTCTCTGCTTCATCTCTAAGATATTATGGCTTGGGGCTGGAAAATGGTTTTTACAACATCACTCTCCAATTTGCTGAGACAGCTATTCTGGATACTACTACATGGAAAAGCCTTGGGAGACGGGTCTTTGATATTTATCTCCAGGGGTCTCGTTTTCTGAAGGATTTTGACATACAAAAGGAAGCTGGAGGCGTCTCTTACAGATCAGTCCAAAGGCAATTTCGGGTTCAAGTGTCAGAAAACTATCTTGAGATTCATCTCTTTTGGGCTGGAAAGGGGACTTGCTGCATACCAAGTCAAGGTACTTATGGGCCCTTGATTCAAGCCATCAGTGCAATCCCAGATTTCATTCCTACTGTCAGTAACAAACCTCCAAGCAGTAATGAGAATAGAGCTGGCCTAATTGCGGGAGTAGTCATTGGTGTTGGAGTTGTATGCTTTCTATCTGTTATTGCAATTTTTTATGTCATTCGGAGAAAAAAGCGCCTTGAAGATGAGGAAGAGCTTTTAGGTATTGATACAAAGCCATACACTTTCAGCTATTCTGAGTTAAAGAATGCTACAAATGACTTTAATCTTGACAACAAGCTCGGAGAGGGGGGTTTTGGACCTGTTTACAAGGGGACACTGAATGATGGGAGAGTTATTGCTGTGAAACAACTATCTGTAGGGTCCCATCAAGGAAAGAGCCAGTTCATAACTGAAATTGCTACTATATCTGCTGTGCAACATCGTAATCTTGTCAAATTATATGGATGTTGCATTAATGGGAGTAAAAGGCTTCTCGTGTATGAGTATCTAGAGAACAAGAGTCTTGATCAAGCATTATTTGGAAAATCCTTAACCCTAAATTGGTCAACACGCTTTGATATCCTCCTGGGTGTAGCAAGAGGTTTAACTTATTTACACGAAGAATCAAGGCTCCGTATCGTACACCGTGATGTGAAGGCTAGTAACATTCTCCTTGATTATGAGCTTGTCCCAAAAATATCTGATTTTGGGTTGGCCAAATTATATGATGATAAAAAGACCCATATAAGCACTGGTGTGGCTGGGACAATTGGATATCTTGCACCGGAGTATGCTATGCGTGGGCACCTTACAGAGAAAGCCGATGTGTTTTCTTTTGGTGTTGTGGCTTTAGAGTTGGTCAGTGGGAGGCCGAATGCTGATACAAGTTTGGAAGGAGAGAGGGTGTATCTTCTAGAATGGGCTTGGAAACTTTATGAAAACGACCGCATACTTGATCTGGTAGATTCTGAACTATCAGAGTTCAACAAGGAAGAAGTAAAGCGAGTTGTGGGAATTGCACTTTTGTGCACTCAGACATCACCAACATTGCGGCCACCGATGTCACGCGTGGTGGCAATGATTTCGGGAGATATTGAAGTGAGTGCTGTAACTTCAAGGCCTGGATACTTGAGTGACTGGAAATTTGATGATGTGAGTCATATGACCAGCATGACGACTGACTCGACAACCAAAGGATCAGATACAAGTTACTATCATTCATCATCAGTTACTAGCACAGTTGGTGGTACAGACCATTCACAAAAAGATGATTCTAAAGCCATGCTTCATGAGACTCTTAATGAGGGTAGTTCTAAGGTTGCAGATATTCCTATGGGTGAAGGTGCTAAGTTCAGAGATTGTTATGAAAGATTGGAAGCTTGTGCCTTTTTCTTGGGTCCTTGCTTGGAGATATTGAGCCTTTAG 3222 0.415 MGQWYLSSHILAFALVVVCIFSCLINIAQAQAANATTDPSEARALNAIFSKWGISADKRQWNISGELCTGNAIDSSTTIDDSTYNPFIKCDCSFSNKTTCHITALKVYAIDVVGEIPEELWTLTYLTNLNLGQNYLTGSIPAAIGNLTRMQYLSMGINSFSGELPKELGNLTNLIVLGFGSNNLSGSLPSELGSLVKLEQVYLDSSGISGPIPSTFASLKNLATVWASDMELTGSIPDFIGNWSKLKSLRFQGNSFGGPIPSSFSNLTSLTELRISELSNGSSSLDFVRNMKSLTILDLRNNNISGSIPSVLGEFQNLTQLDLSFNNITGQIPGSIFNLTSLSHLFLGNNKLSGTLPTEISSSLANIDLSYNDLSGSFPSWVNQPNLQLNFVANNFTVSSNSSGLPTGLNCLQKNFPCNSGTGRYSDFAIKCGGPQVTAADGTVYERENATLGPATYFVTDTNRWGVSNVGWFTGNSNPLYKSFVSNQFTGTVNSELFQTARLSASSLRYYGLGLENGFYNITLQFAETAILDTTTWKSLGRRVFDIYLQGSRFLKDFDIQKEAGGVSYRSVQRQFRVQVSENYLEIHLFWAGKGTCCIPSQGTYGPLIQAISAIPDFIPTVSNKPPSSNENRAGLIAGVVIGVGVVCFLSVIAIFYVIRRKKRLEDEEELLGIDTKPYTFSYSELKNATNDFNLDNKLGEGGFGPVYKGTLNDGRVIAVKQLSVGSHQGKSQFITEIATISAVQHRNLVKLYGCCINGSKRLLVYEYLENKSLDQALFGKSLTLNWSTRFDILLGVARGLTYLHEESRLRIVHRDVKASNILLDYELVPKISDFGLAKLYDDKKTHISTGVAGTIGYLAPEYAMRGHLTEKADVFSFGVVALELVSGRPNADTSLEGERVYLLEWAWKLYENDRILDLVDSELSEFNKEEVKRVVGIALLCTQTSPTLRPPMSRVVAMISGDIEVSAVTSRPGYLSDWKFDDVSHMTSMTTDSTTKGSDTSYYHSSSVTSTVGGTDHSQKDDSKAMLHETLNEGSSKVADIPMGEGAKFRDCYERLEACAFFLGPCLEILSL 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0676 1073 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 143 1019 - -
Lal2g0676 1073 ProSiteProfiles Protein kinase domain profile. 693 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0676 1073 Pfam Protein tyrosine and serine/threonine kinase 694 958 IPR001245 GO:0004672|GO:0006468
Lal2g0676 1073 SMART serkin_6 693 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0676 1073 ProSitePatterns Serine/Threonine protein kinases active-site signature. 812 824 IPR008271 GO:0004672|GO:0006468
Lal2g0676 1073 SMART LRR_typ_2 171 195 IPR003591 -
Lal2g0676 1073 SMART LRR_typ_2 339 363 IPR003591 -
Lal2g0676 1073 SMART LRR_typ_2 291 315 IPR003591 -
Lal2g0676 1073 SUPERFAMILY Protein kinase-like (PK-like) 676 979 IPR011009 -
Lal2g0676 1073 Gene3D Transferase(Phosphotransferase) domain 1 769 970 - -
Lal2g0676 1073 Gene3D Ribonuclease Inhibitor 281 403 IPR032675 -
Lal2g0676 1073 SUPERFAMILY L domain-like 99 400 - -
Lal2g0676 1073 Gene3D - 427 616 - -
Lal2g0676 1073 ProSiteProfiles Leucine-rich repeat profile. 293 315 IPR001611 GO:0005515
Lal2g0676 1073 Gene3D Ribonuclease Inhibitor 38 280 IPR032675 -
Lal2g0676 1073 ProSiteProfiles Leucine-rich repeat profile. 317 339 IPR001611 GO:0005515
Lal2g0676 1073 Pfam Malectin domain 427 612 IPR021720 -
Lal2g0676 1073 CDD STKc_IRAK 699 960 - -
Lal2g0676 1073 Pfam Leucine rich repeat 293 352 IPR001611 GO:0005515
Lal2g0676 1073 Gene3D Phosphorylase Kinase; domain 1 655 768 - -
Lal2g0676 1073 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 143 1019 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0676 Lal-Chr2 4092186 4117820 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0676 107 280 Receptor kinase-like Gene Family AT1G56120 29.310 3.20e-13 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal2g0676 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0676 - - lang:109352863 1900.56