Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0670 ATGGTGGATGGAAGAACAGCATGCTGTGATAAGAATCAGGTTAAGAAAGGCCCTTGGAGTTCTGTAGAAGACATGAAGTTGATAACTTTCATTCAAAAATTTGGCCATGATAATTGGCGTGCTCTCCCTAAAAAAGCAGGACTAATGCGATGTGGGAAAAGTTGTCGTTTAAGATGGGTAAATTATCTGAAGCCTGGCTTGAAGAGAGGGAATTTCACATCAGAGGAAGTGGAAACTATAATTAAGCTGCAACAGGCTTTGGGAAACAAGTGGTCAAGGATTGCTGCTCATTTACCGGGTAGAACAGATAATGAGATCAAGAATATTTGGAACACCCACTTGAAGAAAAGATTGGTTAACAAAAGAACATCAGGGTCTGCTTCAAATGAAAACAAGACTGAATCATCCATAGCACCCTCCATTGTTTCTTCATCTAAGCCATTTTTCTTCAATGAGATACCAAATCTAGTCATTCCTACTGTTGGTAATCAATTCAATATGAATGTATCTCAAGTGGAAATGATAAAGGATCTTGAGCAGGATTCAGTAAAACAAAGGTCGAATTATGAATTTGTTGATATCACCAAGAACCCTAAGCATTCATCAACTTCAGTGTCTTCTATCATGTCAAACATGTCCAATTCAAGCCATATGGATGCTTACAAATTAGGACAACAAATGGGTTCTCCATTCAGGTATTATGGATCTTCTCATGTTAACAAATCATTACAAGAAGCATATATACAAAATTCTCTGGTTGAAATGCCATCGGAGGTAGATTGTGATTTTTGGAAAATGTTAGATAACATGCAAACTCAATCAAATGAAGTCCAATTAGGGCAAGTTGATGCTAGCAAACCCTCAAATTTTGGACAAGAGGGTGTTCAAGATGCTGAAACCGGAAAATATCTACATGATTTAGAATTTGAGTTTGGATTAGATGCAACAAAGGAGACAAACAAGGATCAATGCGTACAGAAGAATAATGCAACTGAGCTAGGAATGTATCCTCATTCATGTGATTATGATTTGATTGCAAGGCCAGAATCTGATTCTGATATAGACTTGGGTTATGTTCAATGGTGGTCTTCTTGGCCTCAAAATCCAGGTCTTTAA 1116 0.3737 MVDGRTACCDKNQVKKGPWSSVEDMKLITFIQKFGHDNWRALPKKAGLMRCGKSCRLRWVNYLKPGLKRGNFTSEEVETIIKLQQALGNKWSRIAAHLPGRTDNEIKNIWNTHLKKRLVNKRTSGSASNENKTESSIAPSIVSSSKPFFFNEIPNLVIPTVGNQFNMNVSQVEMIKDLEQDSVKQRSNYEFVDITKNPKHSSTSVSSIMSNMSNSSHMDAYKLGQQMGSPFRYYGSSHVNKSLQEAYIQNSLVEMPSEVDCDFWKMLDNMQTQSNEVQLGQVDASKPSNFGQEGVQDAETGKYLHDLEFEFGLDATKETNKDQCVQKNNATELGMYPHSCDYDLIARPESDSDIDLGYVQWWSSWPQNPGL 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0670 371 SMART sant 68 116 IPR001005 -
Lal2g0670 371 SMART sant 15 65 IPR001005 -
Lal2g0670 371 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Lal2g0670 371 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Lal2g0670 371 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Lal2g0670 371 PANTHER - 1 333 - -
Lal2g0670 371 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Lal2g0670 371 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Lal2g0670 371 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 333 - -
Lal2g0670 371 CDD SANT 71 114 IPR001005 -
Lal2g0670 371 Gene3D - 70 138 - -
Lal2g0670 371 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Lal2g0670 371 Gene3D - 15 68 - -
Lal2g0670 371 CDD SANT 18 63 IPR001005 -
Lal2g0670 371 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0670 Lal-Chr2 4027320 4029606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0670 1 119 MYB Transcription Factor Family AT1G56160 71.429 2.13e-61 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal2g0670 Myb_DNA-binding 1.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0670 K09422 - gmx:100101836 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0670 2 4027320 4029606 Lal2g0670 2 4027320 4029606 ECH