Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0666 ATGGCATCTTCAATCATGGCTTCTGTGACCATAAAACCAGTTCCTTTCACTGCTCAGAAATCAACACAAGTTAGAGGCCTTCCCTCTCTTGCAAGGACTTCTTCCTTCAAAGTTATGGCCAGTGGTGGCAGGACGAGGAAGATCAAGACTAACAACCCTTATGGAATTAATGGTGGCTTGAACTTCAAGGACGGAGTTGATGCAAATGGTAGGAAAGCAAAGGGAAAGGGTGTTTACCAATTTGTTGACAAGTACGGTGCTAATGTTGATGGATACAGTCCCATCTACAACACCAATGAATGGTCTCCAAGTGGTGATGTCTATGTTGGCGGAAAAACTGGGTTGGCTCTGTGGGCTATAACTCTGCTAGGTCTTCTAGCTGGGAGCGCACTTCTTGTGTACAACACCAGTGCTTTGTCACAATAG 426 0.4531 MASSIMASVTIKPVPFTAQKSTQVRGLPSLARTSSFKVMASGGRTRKIKTNNPYGINGGLNFKDGVDANGRKAKGKGVYQFVDKYGANVDGYSPIYNTNEWSPSGDVYVGGKTGLALWAITLLGLLAGSALLVYNTSALSQ 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0666 141 PANTHER PHOTOSYSTEM II 10 KDA POLYPEPTIDE, CHLOROPLASTIC 1 141 IPR006814 GO:0009523|GO:0009654|GO:0015979|GO:0042651
Lal2g0666 141 Pfam Photosystem II 10 kDa polypeptide PsbR 45 140 IPR006814 GO:0009523|GO:0009654|GO:0015979|GO:0042651
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0666 Lal-Chr2 4004975 4006440 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0666 K03541 - pvy:116139892 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0666 2 4004975 4006440 Lal2g0666 2 4004975 4006440 ECH