Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0623 ATGGAACTTAGAAAATTGAATGGCAGGAGCAAGTTTTGGGTGAAGCAAGAACAAGTATCAGAATTGTGTCAGTGGCAGAAAGATGAGGAAGTAGAAGAACAAGAAGAGAGTAAAATTCTAAATTCAAAGCACCGTATAGGAGAGGAAGAAAACCAAAACTCTCTCCAATTCCAACAACAACAACAACAACATCAAACCTATGTAGATTTTGACACAGACTTGCTATCCCAAATTCCAAAAAAACGATTTTTTCTTCTTCCTCCTCCGTTGTCACCATCACCTTCTATAATCAAACATGCAAGAGGGATGAGGAATACGACAAGAACAAGAGTTGGAGAAATCGTTGAAGTAGAAGGCGGTCACATTGTACGGTCCACAGGGAAAAAAGACCGACACAGCAAAGTATGCACCGCTAAGGGACCAAGAGATAGACGTGTCCGCCTCTCCGCCCACACCGCCATTCAATTCTACGACGTCCAGGACCGTCTCGGCTACGACCGCCCCAGCAAGGCGGTGGATTGGTTGATCAATAAAGCCAAGGCTTCCATCGACCAACTCGCCGAGCTCCCTTCCTGGAATCCAACCACCACAACTAATTACAACCATATAAACGAAATCCTCCACCGCCAACCACCACCTGCGGCGGAGGATGTATTAATTGATTCTAGTAGCCGCAGGGTGGTGTCTGGTGGTGGAAGAATCTCAGAAGAGTTTCAACAACAACAGAAGCAAGAAGAGGAGGACTTTGCTGAAGAGAATAATAACAGGAACAAATATAACAGTGTTTCTTCTGGTTTTCTTCCACTGTCTATGGATACTGATATTGTGGATACGATTAAGTCTTTTTTTCCTGTGGTTGCTGCTTCTAATCACAATCACCAGGAAGATCTACGGCTCTCGTTACAATCATTTCAAGACCCCATTTTGCTTCACTACCACCAACAACAACAGATTCAGCAAATGTTGTTCACCGGAACTAACACGCTTGGGTTTGACGGTGGTGGTTCTTCTGGGTGGTTGGAACAGCACCAGCACCATGGTGAGGAACAGGAACGAGAACATGACCATGGTTGGTTTCATAGAATGGTGGCTTGGAATTCTGCTGTTGCAGATGCTGGTAACAACGGCCATGGTGGTGAATTTGTCTTTAACTCATTGCCACCGTCCACGGTGGCGACTGCGGCGATGATTGGCCATCATGGCCAGCATTTTTCTCAGAGGGGACCCCTTCAGTCCAGTAACACTACTTCGATTCGTGCTTGGATAGACCCGAATTCCTTCACTGCAGCGGCAACTGTCGCTGCCGCCTCCCACCCTAATTATCACTACCTTTCGCCGGCGGTGCATCAGGCTTCTGTCTACGGTGGCATTGGGTTTGCCGCACCTTCTGGTGGCTTCTCCGGCTTCCACATACCAGCACGAATTCGGGGTGAAGAGGAACATGACGGCGTTTCAGACAAGCCGTCCTCTGTTTCCTCTGATTCTCGTCATTGA 1494 0.4732 MELRKLNGRSKFWVKQEQVSELCQWQKDEEVEEQEESKILNSKHRIGEEENQNSLQFQQQQQQHQTYVDFDTDLLSQIPKKRFFLLPPPLSPSPSIIKHARGMRNTTRTRVGEIVEVEGGHIVRSTGKKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLINKAKASIDQLAELPSWNPTTTTNYNHINEILHRQPPPAAEDVLIDSSSRRVVSGGGRISEEFQQQQKQEEEDFAEENNNRNKYNSVSSGFLPLSMDTDIVDTIKSFFPVVAASNHNHQEDLRLSLQSFQDPILLHYHQQQQIQQMLFTGTNTLGFDGGGSSGWLEQHQHHGEEQEREHDHGWFHRMVAWNSAVADAGNNGHGGEFVFNSLPPSTVATAAMIGHHGQHFSQRGPLQSSNTTSIRAWIDPNSFTAAATVAAASHPNYHYLSPAVHQASVYGGIGFAAPSGGFSGFHIPARIRGEEEHDGVSDKPSSVSSDSRH 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0623 497 Pfam TCP family transcription factor 126 258 IPR017887 -
Lal2g0623 497 MobiDBLite consensus disorder prediction 239 254 - -
Lal2g0623 497 MobiDBLite consensus disorder prediction 477 497 - -
Lal2g0623 497 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 102 497 IPR005333 GO:0003700
Lal2g0623 497 Coils Coil 235 255 - -
Lal2g0623 497 ProSiteProfiles TCP domain profile. 128 186 IPR017887 -
Lal2g0623 497 MobiDBLite consensus disorder prediction 230 263 - -
Lal2g0623 497 PANTHER TRANSCRIPTION FACTOR TCP4 102 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0623 Lal-Chr2 3700961 3702586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0623 91 497 TCP Transcription Factor Family AT1G53230 45.667 2.05e-89 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lal2g0623 TCP 7.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0623 - - aip:107630075 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0749 8 5381320 5382384 Lal2g0623 2 3700961 3702586 ECH
Lal2g0623 2 3700961 3702586 Lal2g0623 2 3700961 3702586 ECH