Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0597 ATGGGTCGCCCACCAAGTAATGGAAGCCCTGCCTTTCGCTTCACTCAATCCGAGGCATCTGAAATGGAAACTATTTTGCAAGTACACAACAATGCAATGCCATCACGTGATGTTATTCAAGCGCTTGCAGAGAAGTTTAGTGAATCACCAGACCGTAGAGGCAAGATTACAGTGCAGATCAAGCAGATTTGGAATTGGTTTCAAAATAAGCGGTATGCTATAAGGGCAAAATTAAGTAAGACTCCTGGGAAGTTAAGTAACACAGCTATGCCTCGGGATGATTCTGCTCCAGTAAGGACTACTCCTCCAGGCCCACCACCGAAAGCTTCTCCAACTCCTGCTGCTTCAGGTTCAGTTCCAACAACAGGAAAAGAACCTCCAGAAAATTCGGTTATGGAATTTGAAGCTAAATCTAGAAGAGATGGAGCATGGTATGATGTGGCTTGTTTTCTATCACACAGATATTTGGAGACCAATGATCCGGAAGTTCTAGTACGGTTTGCTGGTTTTGGATCAGAGGAAGATGAGTGGATTAATGTCCGCAGGAATGTCAGGCCACGCTCTTTGCCATGTGAATCATCAGAATGTATAGTAGTTCTTCCTGGAGATCTCATACTATGTTTTCAGGAAGGTAAAGAGCAAGCCCTTTACTTTGATGCCCATGTACTTGATGCTCAAAGGAGGAGGCATGATGTAAGAGGCTGTCGCTGCAGATTTTTGGTTCGTTATGATCATGATCAGACAGAGGAAATTGTGCCACTTAAGAAGATTTGTCGAAGGCCTGAAAGTGAGTACAGGTTACAACAACTCAGAACTCTCAATGAGGCAGCATCTGAGGATCAGCAGAAGACTGCCATGGATCCAGCAAATGTTGATGCTACCAAGGTTTCTGGTGGTTCTTCTGAAACAACGCCAAAGCAGCAACAGAATGCGAGCATTCCTATCATAACACCAGCTCCACAATCAAATGTTTCTCAAGTCCCAAATTTTATGAATGTGGATCCAAAGAAAGCTGAAACAATTCCTAGTTCTTCTGAAACAGCACCGAAGCAGCAGCATTCAAACATTCCTATCATAACACCTGTTCTGCAGACAAATGTTACTCCAGTCCCACATATGATGATTGTGGAACCAAAGAAAGCTGAAGCAGCTATTAATGTTCTATCTGGAAACGACTCCATCGTCCCCCCTGGCTTTGCTAGCATCATTACTACAGGCAGTGTTCCCGAAGTCCCCGGTCAGAACATGGCTGAAGGAAAGTAA 1263 0.441 MGRPPSNGSPAFRFTQSEASEMETILQVHNNAMPSRDVIQALAEKFSESPDRRGKITVQIKQIWNWFQNKRYAIRAKLSKTPGKLSNTAMPRDDSAPVRTTPPGPPPKASPTPAASGSVPTTGKEPPENSVMEFEAKSRRDGAWYDVACFLSHRYLETNDPEVLVRFAGFGSEEDEWINVRRNVRPRSLPCESSECIVVLPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQTEEIVPLKKICRRPESEYRLQQLRTLNEAASEDQQKTAMDPANVDATKVSGGSSETTPKQQQNASIPIITPAPQSNVSQVPNFMNVDPKKAETIPSSSETAPKQQHSNIPIITPVLQTNVTPVPHMMIVEPKKAEAAINVLSGNDSIVPPGFASIITTGSVPEVPGQNMAEGK 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0597 420 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 352 - -
Lal2g0597 420 CDD homeodomain 13 75 IPR001356 GO:0003677
Lal2g0597 420 MobiDBLite consensus disorder prediction 334 353 - -
Lal2g0597 420 MobiDBLite consensus disorder prediction 98 113 - -
Lal2g0597 420 Gene3D - 191 263 - -
Lal2g0597 420 Pfam SAWADEE domain 132 258 IPR032001 GO:0003682
Lal2g0597 420 MobiDBLite consensus disorder prediction 82 130 - -
Lal2g0597 420 ProSiteProfiles 'Homeobox' domain profile. 5 77 IPR001356 GO:0003677
Lal2g0597 420 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 352 IPR039276 -
Lal2g0597 420 SMART HOX_1 7 81 IPR001356 GO:0003677
Lal2g0597 420 Gene3D - 9 84 - -
Lal2g0597 420 SUPERFAMILY Homeodomain-like 12 75 IPR009057 -
Lal2g0597 420 Gene3D - 129 190 - -
Lal2g0597 420 MobiDBLite consensus disorder prediction 276 329 - -
Lal2g0597 420 MobiDBLite consensus disorder prediction 338 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0597 Lal-Chr2 3579029 3587563 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lal2g0597 SAWADEE 2e-40 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0597 - - gmx:100783895 503.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0597 2 3579029 3587563 Lal2g0597 2 3579029 3587563 ECH