Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0594 ATGGATAGTTACTATCACCACCACTTTGACAATAATGATGCACTGTTACCACCTGGTTTTCGTTTCCACCCCACTGATGAGGAGCTTATCACATACTACCTCCTCAAGAAAGTTCTAGACAACACCTTCACTGGCAGAGCCATTACTGAAGTTGACCTCAACAAGTGTGAGCCATGGCAGCTCCCAGGGAAAGCTAAGATGGGTGAGAAGGAGTGGTACTTCTTTAGCTTACGTGACAGGAAGTACCCAACTGGGTTACGTACTAATAGGGCCACCGAAGCTGGTTATTGGAAAGCTACTGGGAAAGACAGGGAAATCTATAGCTCCAAGACTTGTGCACTTGTTGGTATGAAGAAAACTTTGGTTTTCTACAAAGGAAGAGCTCCAAAAGGTGAAAAAAGCAACTGGGTCATGCATGAGTATCGCCTTGAAGGCAAATTTGCTTACCATTACCTCTCTAGGAGCTCCAAGGATGAATGGGTGATATCCCGTGTGTTCGAGAAGAGCACCGCTGGTGGTGGCTCCACCGTGTCTGCCACCGCCACTAACAGTTCCAAGAAGACTAGAGTTAGCACCTCATCGGCCAGCATGAGCCTAGGCCCTGAACCCGGTTCACCATCTTCCATTTACCTTCCACCACTGCTTGACTCTTCTCCTTACGCCGCTAGCAGTGCCGCCACATTCAACGACCTTGATGGCTGCTCCTACGACAGCACCACCGCTGCCCAAAGAGAGCACGTGTCCTGTTTCTCCACAAACTCAGCTAACAACTTCAACAATGCAACCTTTGACTTTGTTCCTCCGCCGCAGCAGACTGCTTTGAATCTTGATCCTTTCACTCGGTTTCAACGCAATGTTGGTGTCTCAGCATTCCCTAGCCTGAGTTCACTCCAAGATAACCTCCAGATGCCGTTCTTTTTCTCTCCCGCCCCGGTCCACGGCGACGGTTCCAGTGACATGGCTGCTTCCCGGAACTGGCCGATGTCGGAGGAGCCGAAGGCTGTGGTGACTGATGGTGATTCCAGCATGGGGCTGGGGCATTCCGTGCTTGATTGCATGTGGGGCTATTGA 1071 0.5051 MDSYYHHHFDNNDALLPPGFRFHPTDEELITYYLLKKVLDNTFTGRAITEVDLNKCEPWQLPGKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCALVGMKKTLVFYKGRAPKGEKSNWVMHEYRLEGKFAYHYLSRSSKDEWVISRVFEKSTAGGGSTVSATATNSSKKTRVSTSSASMSLGPEPGSPSSIYLPPLLDSSPYAASSAATFNDLDGCSYDSTTAAQREHVSCFSTNSANNFNNATFDFVPPPQQTALNLDPFTRFQRNVGVSAFPSLSSLQDNLQMPFFFSPAPVHGDGSSDMAASRNWPMSEEPKAVVTDGDSSMGLGHSVLDCMWGY 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0594 356 SUPERFAMILY NAC domain 11 168 IPR036093 GO:0003677|GO:0006355
Lal2g0594 356 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 330 - -
Lal2g0594 356 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
Lal2g0594 356 MobiDBLite consensus disorder prediction 171 204 - -
Lal2g0594 356 MobiDBLite consensus disorder prediction 171 203 - -
Lal2g0594 356 Gene3D NAC domain 25 172 IPR036093 GO:0003677|GO:0006355
Lal2g0594 356 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-LIKE 7 330 - -
Lal2g0594 356 ProSiteProfiles NAC domain profile. 16 168 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0594 Lal-Chr2 3559613 3561726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0594 4 356 NAC Transcription Factor Family AT5G53950 53.264 2.33e-123 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal2g0594 NAM 4.9e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0594 - - gmx:100788671 491.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0594 2 3559613 3561726 Lal2g0594 2 3559613 3561726 ECH