Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0571 ATGGGAGTTCCAGATAAAGACCCACTTGCACAATTGAGCTTACCTCCTGGTTTTCGGTTTTTCCCAACCGATGAGGAACTTCTCGTTCAATACCTATGTCGCAAGGTTGCTGGTCATCATTTTTCTCTTCCAATCATTGCTGAAATCGATTTGTACAAATTCGACCCATGGGTTCTGCCAGGCAAAGCTATATTTGGTGAGAAAGAATGGTACTTTTTTAGCCCCAGAGACAGGAAGTACCCAAATGGCTCACGACCCAATAGGGTTGCGGGTTCTGGTTATTGGAAAGCAACTGGAACCGATAAGATTATCACTACTGAAGGTAGAAAAGTTGGAATAAAAAAAGCACTAGTTTTCTACATTGGTAAGGCACCTAAAGGCACCAAAACTAATTGGATCATGCATGAATATCGCCTTCTTGATTCTTCCAGAAAGAACAACGGCAGTGCTAAGCTTGATGATTGGGTTCTGTGTCGAATTTACAAGAAGAATTCGAGTGCGCAAAAGACCGTTATACCAAGCTTTTCGAGCAAAGAATACAGCAATGGAGGATCGTCTCCATCTTCATCTTCCCATGTTGAAGACATGATTGAATTACCTGAAATCAATGACCAGTTCTTCGCGCTGCCACGCATGAATTCTCTTAGAACATCGCAGCAGAATCATGATGGTTTTCAGAACCTGGGGAATTTCTCTGATTGGGTAAACTCGTCTGGTCTTGACTCGGTACCCGAGTTTCAAACTCAGGGGATGGTGAATTACGGTGAAAATGACCTCTTTGTCCCTTCTATGCCACAGTTCTGCCACGTGGACTTGACGGGGCAACAGATGGAGGATGAGGTTCAGAGTGGCTTCAGGAACCAACGAAGGATTAATGAAAATTCTGGGTATTATCAACAGAATCCAAATGTGTTCATGCAATATAATGACCCGTTCAGTTTTGGATACCCAAATCAGCAAGACGGATTCGGGTTCCGTAAATGA 984 0.4329 MGVPDKDPLAQLSLPPGFRFFPTDEELLVQYLCRKVAGHHFSLPIIAEIDLYKFDPWVLPGKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRLLDSSRKNNGSAKLDDWVLCRIYKKNSSAQKTVIPSFSSKEYSNGGSSPSSSSHVEDMIELPEINDQFFALPRMNSLRTSQQNHDGFQNLGNFSDWVNSSGLDSVPEFQTQGMVNYGENDLFVPSMPQFCHVDLTGQQMEDEVQSGFRNQRRINENSGYYQQNPNVFMQYNDPFSFGYPNQQDGFGFRK 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0571 327 ProSiteProfiles NAC domain profile. 14 163 IPR003441 GO:0003677|GO:0006355
Lal2g0571 327 PANTHER NAC DOMAIN-CONTAINING PROTEIN 55 1 301 - -
Lal2g0571 327 SUPERFAMILY NAC domain 10 164 IPR036093 GO:0003677|GO:0006355
Lal2g0571 327 Gene3D NAC domain 23 169 IPR036093 GO:0003677|GO:0006355
Lal2g0571 327 PANTHER NAC TRANSCRIPTION FACTOR 56 1 301 - -
Lal2g0571 327 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0571 Lal-Chr2 3450491 3452124 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0571 1 324 NAC Transcription Factor Family AT4G27410 57.971 1.16e-120 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal2g0571 NAM 2.6e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0571 - - adu:107478293 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0571 2 3450491 3452124 Lal2g0571 2 3450491 3452124 ECH