Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0570 ATGGAGAGCACCGATTCATCCATCGGTTCACAACAACCAAACCTACCACCCGGGTTCCGGTTCCACCCTACAGATGAAGAACTCGTGGTTTACTACCTCAAGAAGAAGGTTTCCTCTGAACCTCTCCCTGCATCTATAATCGCCGATGTTGATCTCTATAAGTTCGATCCATGGGAACTACCTGGTAAGGCATCATTTGGTGAGCAAGAATGGTACTTTTTCAGCCCAAGGGAGAGGAAGTACCCGAATGGAGCGAGGCCAAACAGGGCATCAACTTCTGGGTATTGGAAGGCCACAGGAACTGATAAGCCTGTTTTGAGTTCTAGTGGTGCCCAGAAAGTTGGGGTAAAGAAAGCTTTGGTTTTCTATAGTGGGAAGCCACCAAAAGGTACCAAGACCAATTGGATCATGCATGAGTATCGTATTGCGGATAACAAGCCTATCAATAATAAACCTCCTGGCTGTGACTTGGGCAACAAGAAAAACTCTTTAAGGCTGGATGATTGGGTATTGTGCAGAATCTACAAGAAGAGCAATACACATAGGTCAGCCATGGAGCATGACAGGGATGATTCCATGGATGAAATTATTGGAGGGGTACCTTCATCTATCAACGTGGACCTCATGAATGCTAGGTTTCACCTTTCAAAGATGTCCACAAGCTACAGTGGTAGTAGTAATGGTGCATTGTTGGAAAATGACCAAAATTTGTTGGAAGGGTTGATGTTAGGAAATGGTGGGTTGAGCACAACAACAACTACAAATGCCATATCATCACATTTGGAAACCTCAAACTCCAAAAGAACCCTTTCATCTTTGTATTGGAATGACCATACTGAAAATGTGACTGCTGGCACTTCATTATCTAACAAAAGGTTCAACTTTATGGACAGTGCAGCTGGGGATGGCAATGTTGCAATGAGGAATGAAGAGAATGGAACTGCTACTAGCTCTATAGCCACCCTGTTTAGCCATCTCCCACAACAAACACCTAATCCATTGCACCAACAAGAGATAATGCAGAGGACTATAGGAGATGGCCTACTTCGGACACCATATCAAATACAAGGGATGAATTGGTATGGTTAA 1089 0.4389 MESTDSSIGSQQPNLPPGFRFHPTDEELVVYYLKKKVSSEPLPASIIADVDLYKFDPWELPGKASFGEQEWYFFSPRERKYPNGARPNRASTSGYWKATGTDKPVLSSSGAQKVGVKKALVFYSGKPPKGTKTNWIMHEYRIADNKPINNKPPGCDLGNKKNSLRLDDWVLCRIYKKSNTHRSAMEHDRDDSMDEIIGGVPSSINVDLMNARFHLSKMSTSYSGSSNGALLENDQNLLEGLMLGNGGLSTTTTTNAISSHLETSNSKRTLSSLYWNDHTENVTAGTSLSNKRFNFMDSAAGDGNVAMRNEENGTATSSIATLFSHLPQQTPNPLHQQEIMQRTIGDGLLRTPYQIQGMNWYG 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0570 362 SUPERFAMILY NAC domain 7 177 IPR036093 GO:0003677|GO:0006355
Lal2g0570 362 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Lal2g0570 362 ProSiteProfiles NAC domain profile. 15 177 IPR003441 GO:0003677|GO:0006355
Lal2g0570 362 MobiDBLite consensus disorder prediction 1 21 - -
Lal2g0570 362 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 335 - -
Lal2g0570 362 Gene3D NAC domain 24 182 IPR036093 GO:0003677|GO:0006355
Lal2g0570 362 PANTHER NAC TRANSCRIPTION FACTOR 56 1 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0570 Lal-Chr2 3436605 3439499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0570 1 361 NAC Transcription Factor Family AT3G15510 51.554 2.77e-116 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal2g0570 NAM 5.6e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0570 - - gmx:100170710 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0570 2 3436605 3439499 Lal2g0570 2 3436605 3439499 ECH