Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0555 ATGATATTATCAGCATCAACATCTCCTACGAGGAGGAGTAGATTGGAAGAGATGCTTGATTCGCTTCGCCAGAAAGACGAAGAACAAGAGCAGATGAAGAACTCGCCGCCGGCATTGCCTCCACGTCCCATATCAAAGGGCCGGCTTCCTCCGGCGAGGCGATCATTGCCGAATGACTTCAAGGTCAGCAGTGGTGGTGGCGCGGAGGAGTGTTCGCCGAATGGATTTGATGCCAAGGAAGAGAGCAATAGGAAGGAAAAAGAGTTGGGACTTGTACAGAAGAGAAGTAGTAGTTTTGGGAGCAAGAGGGTGAAGATGGATGTGGGATCGCCTTATATGGTTACATTACAAGAGAGCAAATCACTTTTGACATCTACTACTTCATCGGGGAAGATAAAAGAGTTGGAAAATGATAGCATTTCTTATTTCATAAAAAAGATGAGCGGACACACTAGACAAGATAGGAATAGAAATGAGGACATTAGGGATAAAGTTGAAGTAACTCCTATTGTAGAAAAGATGGTAGAATCGCGCCTTAGGTGGTTTCGACATGTGCGTAAGAGACCATTAGAAGCCTCAATAAGGATGAATCAAATGGGGAAACTTGGTGTTTGGTGTAAGCAACCAAGAGGACAGTGGGAGCTAGGAACTATACAGTCAACCTCGGGAGAGGAAGCATCTGTGCTACTCTCAAACGGAAATGTTACTAAAGTGGCCAAATCAGAGCTCCTACCAGCTAATCCTTATATTTTAGAGGGCACAAATGATCTTGTCAAACTCAGTTATTTGAATGAGCCATCCATTGTTCATAATCTTCAGTTGAGATATTCTAAGGAAATGATTTATACTAAAGCAGGGCCTATTTTGATTGCACTCAATCCCTTCAAAGATCTCCAGATTTATGGAAATGATTATGTCCCAGCTTGTAGGCAGAAGTTCATTGATAGTCCTCATGTTTATGCTATGGCAGATGCAGCTTATAACGAGATGATAACAGATGAAGTAAATCAGTCTATAATCATAAGTGGTGAGAGTGGATCAGGGAAGACAGAGATGGGAAAATTTGTTATCCAATACTTAGCTGCTGTTGGTGGTGGCAGTTGTGGAATAGAGAATAAAATTCTTCAAACAAGTTGTATACTAGAAGCTTTTGGGAATGCTAAAACATCTAACAATGACAACTCAAGCAGATTTGTTTCCTATCAAGGAAAGTTGATTGAAATGCATTTCAGTGCAATGGAGAGACTGAATCTTAGAGATGTCAGTGATTATAAATATCTTAATCAGAGTGACTGCATGACAATTGGCGGCATTGATGATGCTAAGAAATTTCAGGAGCTGACGAAAGCGCTCGATGCTGTTCGAGTTTGTGAGGATGATCAAGAGCTGATATTTAAGATGGTTGCTGCAATACTTTGGCTGGGAAATATATCATTCCTAGTTACTGATAGTGAAAATTGCATTGAGGTTGTTGATGATGAAGCTGTAACCAGTGCTGCCCGACTGATGGGCTGCAGCTCTCAAGAATTAATGGCAGCATTATCTACCCATGGATCCCAATCTGAAAATGGCACTATTGCCAAAAGGTTGAAATTGCAGCAGGCAATTGATACAAGAGATGCAATTGCAAAATTTATCTATGCAAGCTTGTTTGAGTGGCTAGTAGAACAACTTAACAAGTCACTTCAAGTGGGTAAAAAATGTACTGGTAAATCCATAAGTATCCTTGATATTTATGGGTTTGAGACCCTTCAGAAAAACAGTTTTGAACAGTTCTGTATAAATTATGCCAATGAGAGGCTTCAACAACATTTCTATCGACATTTGTTTAAACTCGAGCAGGAGGACTACGAATCCGATGGCATTGATTGGACTAAAATAGATTTTGAGGACAACCAAGAGTGCTTGAATCTCTTTGAGAAGAAACCTTTGGGTCTACTCTCTTTGTTGGATGAGGAATCAAATTTACCTAAGGCTTCTGATCTAACATTTGCCAACAAACTTAAGCAGCACCTGGATGCTAATCCTTGTTTCAAAAGGGAAAGAGGCAGAGCTTTCTGTGTTCGTCACTATACAGGGGAGTTTTTCTCCAAAGCGTTTTGCCAGACTCAGAAACAATCAAATTCCATCCACACAGTTGCGCTAGACTCACAAAAGCAGAGTATTGGAACAAAGTTCAAGGATCAATTGTTCAAGTTGATGCGTCAGTTGGAGAGCACTAAACCTCATTTTATTCGCTGTATAAGGCCAAATACTAAGCAACGACCTGGCATTTATGATGTGGACCTTGTTCTACAACAGCTCAGGTGTTGTGGAGTTCCAGAGGTTGCTAGAATTTCAAGGGTTGGATATCCTACGCGAATAACTCATGAAGAGTTCTCCAGAAGGTACGGGTTTCTGCTTTCTGAGGTCAACATATATCAGGACCCATTGAGTATCTCAATTGCTGTTTTGCAAGAATTTAATATCCCTTTTGAAATGTATCATTTTGGCCACACCAAACTGTTTCTTCGAGCGGGGCAGATTGGGGCACTGGAGGATAAGAGAAAACTGGTTTTGCAGGGAATACTGTTGGTTCAAAAATGCTTCCGTGGTTATCAAGCTCGCAGTTATTTCCGTGAATTTATGAACGGTGTGACAACATTACAATCAGGTACTGCCGTTGTTCGGGGAGAAATTACGAGAAGGAAACACGGTCTTACAGTGCAATCTTATATAACGATTTATTCCAAAAATCTTGAGGAGATCAATGCAATAATACTACTACAATCTGTAATTCGTGGGTGGGTGGTTCGAAGGGATGCCAGTGGCATGAACAAGTCGAAATATCCTGAAAATGCAAAACCTAGGCAGAAATCACGTGCGAGGATGCCAGAAGTGAAGGATATGACCAAAGAGCAGGATCAGTCAGCTTTAGAAGAACTTCAAAGGCGAGCTGTCAACGCTGAAGCGATTGCAGAGCAAAAGGAAGAGGAAAATACTGAATTGAAGAAACAGCTAAAACGATCTGAGGAAAGATGGACTGAATATGAGGCAAAGATGAAATCAGTGGAGGAGACACGGCAAAAACAGATGGCATCTTTGCAAACGAGTCTTGTTGCTGCTAGAAAGAGCCTTGCTTCTGGGAATGCTACCGTTCAACATGCAAGACATGATGTTGTGCCGACTCACTATTTTGGTTCTGAAGAAGCTACTTCCATGGGATCTCCAACAAGTGGTAGGAATACCCCTGTGAAGTTTTCTAGTGGCCTCCTTGTCTCTGATGGAGGGAGACAGGTTAATGGTACTTCGGCCGCAGTCAGTAATTTGACGAAGGAATTTGAGCTAAGGAGACAGAACTTTGATGATGAAGTAAAAGTTCTGAACGATCATAAACAAGGGCAGTCTGCTAAAGCGGATAACATTCAAGAACTTCGGAAACTTAAAGATAGATTTGAGGCATGGAAGAAGCAATACAAGGTTAGGTTACGTGAGACAAAAGCAAGGCTTCTCAAGGCAGAAGGGAGGAAAAGTCGGTGGTCATGGTGGGAAAAATTAAGCTTGAAGGGCAAATGA 3555 0.4155 MILSASTSPTRRSRLEEMLDSLRQKDEEQEQMKNSPPALPPRPISKGRLPPARRSLPNDFKVSSGGGAEECSPNGFDAKEESNRKEKELGLVQKRSSSFGSKRVKMDVGSPYMVTLQESKSLLTSTTSSGKIKELENDSISYFIKKMSGHTRQDRNRNEDIRDKVEVTPIVEKMVESRLRWFRHVRKRPLEASIRMNQMGKLGVWCKQPRGQWELGTIQSTSGEEASVLLSNGNVTKVAKSELLPANPYILEGTNDLVKLSYLNEPSIVHNLQLRYSKEMIYTKAGPILIALNPFKDLQIYGNDYVPACRQKFIDSPHVYAMADAAYNEMITDEVNQSIIISGESGSGKTEMGKFVIQYLAAVGGGSCGIENKILQTSCILEAFGNAKTSNNDNSSRFVSYQGKLIEMHFSAMERLNLRDVSDYKYLNQSDCMTIGGIDDAKKFQELTKALDAVRVCEDDQELIFKMVAAILWLGNISFLVTDSENCIEVVDDEAVTSAARLMGCSSQELMAALSTHGSQSENGTIAKRLKLQQAIDTRDAIAKFIYASLFEWLVEQLNKSLQVGKKCTGKSISILDIYGFETLQKNSFEQFCINYANERLQQHFYRHLFKLEQEDYESDGIDWTKIDFEDNQECLNLFEKKPLGLLSLLDEESNLPKASDLTFANKLKQHLDANPCFKRERGRAFCVRHYTGEFFSKAFCQTQKQSNSIHTVALDSQKQSIGTKFKDQLFKLMRQLESTKPHFIRCIRPNTKQRPGIYDVDLVLQQLRCCGVPEVARISRVGYPTRITHEEFSRRYGFLLSEVNIYQDPLSISIAVLQEFNIPFEMYHFGHTKLFLRAGQIGALEDKRKLVLQGILLVQKCFRGYQARSYFREFMNGVTTLQSGTAVVRGEITRRKHGLTVQSYITIYSKNLEEINAIILLQSVIRGWVVRRDASGMNKSKYPENAKPRQKSRARMPEVKDMTKEQDQSALEELQRRAVNAEAIAEQKEEENTELKKQLKRSEERWTEYEAKMKSVEETRQKQMASLQTSLVAARKSLASGNATVQHARHDVVPTHYFGSEEATSMGSPTSGRNTPVKFSSGLLVSDGGRQVNGTSAAVSNLTKEFELRRQNFDDEVKVLNDHKQGQSAKADNIQELRKLKDRFEAWKKQYKVRLRETKARLLKAEGRKSRWSWWEKLSLKGK 1184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0555 1184 ProSitePatterns Sigma-54 interaction domain ATP-binding region A signature. 339 352 IPR025662 -
Lal2g0555 1184 MobiDBLite consensus disorder prediction 13 32 - -
Lal2g0555 1184 ProSiteProfiles IQ motif profile. 854 881 IPR000048 GO:0005515
Lal2g0555 1184 Gene3D Kinesin motor domain 217 414 IPR036961 -
Lal2g0555 1184 Coils Coil 965 1020 - -
Lal2g0555 1184 Coils Coil 12 35 - -
Lal2g0555 1184 PRINTS Myosin heavy chain signature 282 301 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal2g0555 1184 PRINTS Myosin heavy chain signature 336 361 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal2g0555 1184 PRINTS Myosin heavy chain signature 572 600 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal2g0555 1184 PRINTS Myosin heavy chain signature 625 653 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal2g0555 1184 PANTHER MYOSIN 697 1182 - -
Lal2g0555 1184 PANTHER MYOSIN 413 712 - -
Lal2g0555 1184 PANTHER MYOSIN 36 412 - -
Lal2g0555 1184 MobiDBLite consensus disorder prediction 1 91 - -
Lal2g0555 1184 Gene3D - 784 895 - -
Lal2g0555 1184 MobiDBLite consensus disorder prediction 985 1004 - -
Lal2g0555 1184 MobiDBLite consensus disorder prediction 945 961 - -
Lal2g0555 1184 Pfam IQ calmodulin-binding motif 856 873 IPR000048 GO:0005515
Lal2g0555 1184 Pfam IQ calmodulin-binding motif 917 933 IPR000048 GO:0005515
Lal2g0555 1184 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 199 248 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lal2g0555 1184 Gene3D Myosin VI head, motor domain, U50 subdomain 453 561 - -
Lal2g0555 1184 SMART MYSc_2a 246 851 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal2g0555 1184 MobiDBLite consensus disorder prediction 939 961 - -
Lal2g0555 1184 MobiDBLite consensus disorder prediction 74 91 - -
Lal2g0555 1184 Gene3D Kinesin motor domain 562 783 IPR036961 -
Lal2g0555 1184 Gene3D - 584 740 - -
Lal2g0555 1184 SMART iq_5 914 936 IPR000048 GO:0005515
Lal2g0555 1184 SMART iq_5 851 873 IPR000048 GO:0005515
Lal2g0555 1184 ProSiteProfiles IQ motif profile. 915 944 IPR000048 GO:0005515
Lal2g0555 1184 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 226 934 IPR027417 -
Lal2g0555 1184 Coils Coil 1131 1169 - -
Lal2g0555 1184 ProSiteProfiles Myosin motor domain profile. 252 850 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal2g0555 1184 CDD MYSc_Myo8 266 838 IPR036022 -
Lal2g0555 1184 Gene3D - 415 452 - -
Lal2g0555 1184 Pfam Myosin head (motor domain) 704 838 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal2g0555 1184 Pfam Myosin head (motor domain) 413 696 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal2g0555 1184 PANTHER MYOSIN-2 ISOFORM X1 413 712 - -
Lal2g0555 1184 PANTHER MYOSIN-2 ISOFORM X1 697 1182 - -
Lal2g0555 1184 PANTHER MYOSIN-2 ISOFORM X1 36 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0555 Lal-Chr2 3353781 3364055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0555 1 1178 Myosins gene family AT5G54280 50.078 0.0 1179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0555 K10357 - gmx:100819335 1405.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0555 2 3353781 3364055 Lal2g0555 2 3353781 3364055 ECH