Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0550 ATGGAGAAAATGAAAGAGGCATGCGAGCTTTGTGAGAAGAAGGCAAAGGTGCATTGTGATTCAGACCAGGCTAACCTATGTTGGGGCTGCGATGCGAGAGTTCACAGTGCAAATTTCTTGGTTCAGAAACACGTGAGGGTTCTTCTATGCCGTAGTTGTAATTGTCATACTCAATGGAAAGCATGTGGCTCAAAACTAATTCCTTCTGCTTCAATATGCCACCGTTGCGTGGCCAATGGAGTCACCAGATTACATCATCGTGTGGTGGATGATGATAGTGAAAAAGAAGATGAAGAAGAGAATCAAGTGGTGCCAGTTTACTCACCTTTATCGCTTGATTCTTCTGCTTCTGCATTGAACGGCGAAGAGACAGGTTGCTCTACTTCATCTGAAATGCACTCTGCAACAGCAACATTGGCCAGTGGAGAGGAATCAATAATGAATACAACTTTCAAAGGAGAGGATCCTTCTTCTAATCAATCACTCACCCTTCACAATTAG 501 0.4351 MEKMKEACELCEKKAKVHCDSDQANLCWGCDARVHSANFLVQKHVRVLLCRSCNCHTQWKACGSKLIPSASICHRCVANGVTRLHHRVVDDDSEKEDEEENQVVPVYSPLSLDSSASALNGEETGCSTSSEMHSATATLASGEESIMNTTFKGEDPSSNQSLTLHN 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0550 166 MobiDBLite consensus disorder prediction 141 166 - -
Lal2g0550 166 PANTHER OS08G0178800 PROTEIN 4 136 - -
Lal2g0550 166 CDD Bbox1_BBX-like 7 49 - -
Lal2g0550 166 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 136 - -
Lal2g0550 166 SMART bboxneu5 3 49 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0550 Lal-Chr2 3320262 3320873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0550 5 78 C2C2-CO-like Transcription Factor Family AT5G54470 58.108 5.08e-26 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal2g0550 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0550 - - lang:109351897 213.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0552 1 3571170 3571640 Lal2g0550 2 3320262 3320873 LSH
Lal2g0550 2 3320262 3320873 Lal9g0484 9 3258023 3258749 LSH