Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0548 ATGATCATTGCCCTCACAAGCATCACTCCAGATAAATCCATTCATGACAATGAGACTTTGGTTTCTGAAGCTGCAACTTTTGAAGCTGGATTCCTCACCTTGGGGAATACACAGAACCTATACTTTTGTATATGGTACAAGAATATAACGCCTAGAACAATTGTATGGGTAGCCAACAGAGACACACCAATATATAACACAACACCACTTTTCAAACTCACTGATGTAGGAAATCCAGTTATACTTGATGCCTCAGGAGGTATCACTGTGTGGTCTTCAAATGCATCAAAAACTTCAGTGGAGCCAGTTCTATTGCTTTTAGACACAGGAAACCTTGTTGTAAGAGATGGTAGTAGCACTGAGAATAACATTGTGTGGCAAAGCTTTGATTATCCTGGTGATACTTTACTCCCAGGGATGGCACTTCATGTAAATAGAGATAGTGGTGTGTATAATTCTTTGATATCTTGGAAAAATTCATTAGATCCTGAAAGAGACAGAAACTTGGCAACTCTCCAAGCAGGACCTGCAGACCGGAAGGTAAATTTGAGTTGTGATGATAGTGATGGCTTTTTGAAGTTTACAGGAATGAAATTGCCGGACACATCTTCATCCTGCATCATGGACATGAGGAAAGAAAGCTCTCAATGGCAAGAAATTTACATAAGATTGGCTGCTTCAGAGTTAGAAAGTGGGATAGCTCGAGGACTTCTTTATCTTTATCAAGATTCTAGACTAAGAATCATACATCTTAAAACTAGTAATGTTCTCCTAGATAACAATATGAATCCAAAAATATCAGACTTTGGACTAGCTAGGGCTTTCGGTGGTGATCATGCTGAGGCTAATACAATAAGAATCGTGGGAACTCATGGTTACATGCCCCCTGAGTATGCAGTGTATGGTTCTTTTTCAGTGAAGTCTGATGTCTTTAGCTTTGGTTTTATTGTTCTAGAGATGGTTAGTGGTAGGAAGAACAGAGAATTTTCTGACCCACTGCATAGCCTTAACCTTCTTGGACATCTTCAGTCACTTACTGATGGCAATACCTTGGTTTCTGAGGATGGAAGATTTGAGTTAGGTTTCTTCACTCCAGGTACATCTATAAACCGCTATGTAGGATTATGGTACAAAAATATACAAGTTAAAACTGTTGTTTGGGTTGCTAACCGTGACAACCCAATAAAAGACAACTCTAGCATGTTGAGCATAAACACAGAAGGAAACCTTGTCCTTTTAAACCTCAACAATATTGTTCTTTGGTCAGCAAATACAACAACAAATGCAACAACAAAGGCGTCCAACATAGTAGCACAGCTCTTAGATTCTGGAAACTTGGTTCTAAGAGAGGAGAATGATAGTAATGCTCAAAACTACTTGTGGCAGAGCTTTGATTATCCATCTGATACATTGTTGCCAGGAATGAAACTTGGATGGAACTTCAAGACTGGTCTTAATCGGCGTCTAATTGCTTGGAAGAACTGGGACGATCCGTCTCGGGGAGACTTAATATGGGGTTTGGTACCTAACAACAATCCTGAATTAGTGATGTGGAAGGGATCACAAGTGTTCTATAGAAGTGGTCCTGCGGTTGGCACGCAATTCAGCGGTAGTTCAACGTTGGGGTCTAGTTCAGACATCAACTATACATTTGTGTTCAACAAGGATGAATTGTATTTCTCACATAACTTCATTGACAAGTCATTGCTTTTAATACTTGTTTTGAATCAAACAACTAGTTCCGGTCAGCGTTTAACATGGAATAGTGATACTCAAACATGGAGAATGTCTTCACTTGTGCCTATAGATTATTGTGACACCTATAATCTTTGTGGCCCATTTGGAAACTGTATTACCGGGGCGGCTCCTATTTGCAGTTGCTTAGAAGGGTTTAGGCCAAAATCACAGCAGAATTGGAGCCAGGGAGTATGGACTCAAGGATGCATGCACAATGGAAATTGGAGCTGCAGGGTGGAGACTAGAGATAGCTTCAAAAAATTCAGTAACATGAAGATGCCTGATACCACAAGATCCTGGCTTAATGAAAGTATGACACTAGAGGAATGCAAATTACAATGCTGGGAAAACTGTTCCTGTTCGGCTTATGCAAATTCTGACACAACGGGACAAGGTAGTGGCTGTTCCATGTGGTTTAGTGATCTGCTGGATTTGAGAGAGATTTCAAATGGTGGGCAAGATCTTTATGTTAGATTGGCAGCCTCAGAAATAGGTCAAGATGCTAAAGGTGATTCAAAGAAAAAGGTGATTGTGATCACAAGCACCGTTTCATCTCTTTTTGTGATGCTTTTGATTTTTACTCTTATATATTGGAAGAGGAGATCAAAATTTAAAGAGATCCCAGAATGGACAAGAGATAAGAACAATGAAAACGAACAAGAAGACTTGGAGGTACCTCTGTTTGATCTTTCTTTGATAAAGCATGCCACTAATGATTTCTCAACTTACAATAAGCTTGGTGAAGGTGGTTTTGGGCCTGTATACAAGGGAACATTACCAGATGGACAAGAGATTGCTGTCAAGAGGCTTTCACAGACATCTAAACAAGGACTAAGAGAATTTAAGAACGAGGTTGAGTTATGTGCTAGACTTCAACACCGAAATCTTGTTAAAGTCCTTGGTTGTTGCATTCAAGAAGATGAGAAAATGCTTATATATGAATTCATGGCCAACAAAAGCTTGGATTTCTTTCTTTTTGATTCTGCTCAAAATAGACTTCTAGAATGGCCTATGCGTTTTTACATTATATCTGGAATTGCTCGAGGGCTACTTTATCTACATCAAGATTCGAGATTAAGAATCATACATAGAGATCTTAAGGCAAGTAATGTTTTATTAGACAATGAGATGAATCCAAAAATTTCCGACTTTGGTTTGGCCCGAATGTGTGGAGGTGATCAAATTGAAGGAAATACGAATAGAGTAGTCGGTACATATGGTTATATGGCTCCTGAGTATGCCTTTGAGGGACTATTCTCCATCAAATCTGACGTATTTAGCTTTGGCATATTATTATTAGAGATAGTGAGTGGCAAGAAAAGCATTGGACTATCTGATCAAAGCCACAACAGTAATCTTATTGGGCATGCATGGAGATTGTGGAAAGATGGCATGGCAATTCAATTGATTGATGATTGTTTAAAGGAATCATGTGTTCATTTAGAAGCCTTGAGGTGCATTCACATTGGTCTTTTATGTGTACAACAGCATCCTAATGATAGACCCAACATGGCATCAGTGGTTGTAATGTTGAGTAATGAGAGTGTTTTGGCTCAACCCAAAGAGCCTAGTTTCTTAATTGAAAAGACTTCAATAGTAGGAGATTATCATATGGAGTGCCAAAGATCATCATCAATAAATGAAGTCAGTGTTTCAATCTTGAGCGCAAGATAG 3411 0.3905 MIIALTSITPDKSIHDNETLVSEAATFEAGFLTLGNTQNLYFCIWYKNITPRTIVWVANRDTPIYNTTPLFKLTDVGNPVILDASGGITVWSSNASKTSVEPVLLLLDTGNLVVRDGSSTENNIVWQSFDYPGDTLLPGMALHVNRDSGVYNSLISWKNSLDPERDRNLATLQAGPADRKVNLSCDDSDGFLKFTGMKLPDTSSSCIMDMRKESSQWQEIYIRLAASELESGIARGLLYLYQDSRLRIIHLKTSNVLLDNNMNPKISDFGLARAFGGDHAEANTIRIVGTHGYMPPEYAVYGSFSVKSDVFSFGFIVLEMVSGRKNREFSDPLHSLNLLGHLQSLTDGNTLVSEDGRFELGFFTPGTSINRYVGLWYKNIQVKTVVWVANRDNPIKDNSSMLSINTEGNLVLLNLNNIVLWSANTTTNATTKASNIVAQLLDSGNLVLREENDSNAQNYLWQSFDYPSDTLLPGMKLGWNFKTGLNRRLIAWKNWDDPSRGDLIWGLVPNNNPELVMWKGSQVFYRSGPAVGTQFSGSSTLGSSSDINYTFVFNKDELYFSHNFIDKSLLLILVLNQTTSSGQRLTWNSDTQTWRMSSLVPIDYCDTYNLCGPFGNCITGAAPICSCLEGFRPKSQQNWSQGVWTQGCMHNGNWSCRVETRDSFKKFSNMKMPDTTRSWLNESMTLEECKLQCWENCSCSAYANSDTTGQGSGCSMWFSDLLDLREISNGGQDLYVRLAASEIGQDAKGDSKKKVIVITSTVSSLFVMLLIFTLIYWKRRSKFKEIPEWTRDKNNENEQEDLEVPLFDLSLIKHATNDFSTYNKLGEGGFGPVYKGTLPDGQEIAVKRLSQTSKQGLREFKNEVELCARLQHRNLVKVLGCCIQEDEKMLIYEFMANKSLDFFLFDSAQNRLLEWPMRFYIISGIARGLLYLHQDSRLRIIHRDLKASNVLLDNEMNPKISDFGLARMCGGDQIEGNTNRVVGTYGYMAPEYAFEGLFSIKSDVFSFGILLLEIVSGKKSIGLSDQSHNSNLIGHAWRLWKDGMAIQLIDDCLKESCVHLEALRCIHIGLLCVQQHPNDRPNMASVVVMLSNESVLAQPKEPSFLIEKTSIVGDYHMECQRSSSINEVSVSILSAR 1136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0548 1136 SMART ntp_6 659 738 IPR003609 -
Lal2g0548 1136 Pfam PAN-like domain 656 724 IPR003609 -
Lal2g0548 1136 SMART serkin_6 819 1066 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0548 1136 Pfam S-locus glycoprotein domain 525 635 IPR000858 GO:0048544
Lal2g0548 1136 Pfam D-mannose binding lectin 53 158 IPR001480 -
Lal2g0548 1136 Pfam D-mannose binding lectin 384 493 IPR001480 -
Lal2g0548 1136 Gene3D - 341 464 IPR036426 -
Lal2g0548 1136 Gene3D - 4 129 IPR036426 -
Lal2g0548 1136 SUPERFAMILY alpha-D-mannose-specific plant lectins 385 498 IPR036426 -
Lal2g0548 1136 ProSitePatterns Serine/Threonine protein kinases active-site signature. 940 952 IPR008271 GO:0004672|GO:0006468
Lal2g0548 1136 ProSiteProfiles Bulb-type lectin domain profile. 5 127 IPR001480 -
Lal2g0548 1136 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 346 1130 - -
Lal2g0548 1136 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 231 343 - -
Lal2g0548 1136 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 13 165 - -
Lal2g0548 1136 ProSiteProfiles Bulb-type lectin domain profile. 336 461 IPR001480 -
Lal2g0548 1136 SUPERFAMILY Protein kinase-like (PK-like) 802 1090 IPR011009 -
Lal2g0548 1136 CDD B_lectin 343 467 IPR001480 -
Lal2g0548 1136 SMART blect_4 342 467 IPR001480 -
Lal2g0548 1136 SMART blect_4 11 132 IPR001480 -
Lal2g0548 1136 Pfam Protein kinase domain 227 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0548 1136 CDD STKc_IRAK 825 1090 - -
Lal2g0548 1136 ProSiteProfiles PAN/Apple domain profile. 656 739 IPR003609 -
Lal2g0548 1136 ProSiteProfiles Protein kinase domain profile. 819 1096 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0548 1136 Gene3D Phosphorylase Kinase; domain 1 782 894 - -
Lal2g0548 1136 SUPERFAMILY alpha-D-mannose-specific plant lectins 54 163 IPR036426 -
Lal2g0548 1136 Gene3D Transferase(Phosphotransferase) domain 1 895 1103 - -
Lal2g0548 1136 Gene3D Hepatocyte Growth Factor 655 738 - -
Lal2g0548 1136 ProSiteProfiles Protein kinase domain profile. 1 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0548 1136 ProSiteProfiles EGF-like domain profile. 601 637 IPR000742 -
Lal2g0548 1136 CDD PAN_AP_plant 655 739 - -
Lal2g0548 1136 Pfam Protein tyrosine and serine/threonine kinase 821 1088 IPR001245 GO:0004672|GO:0006468
Lal2g0548 1136 CDD B_lectin 11 132 IPR001480 -
Lal2g0548 1136 SUPERFAMILY Protein kinase-like (PK-like) 231 338 IPR011009 -
Lal2g0548 1136 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 231 343 - -
Lal2g0548 1136 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 13 165 - -
Lal2g0548 1136 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 346 1130 - -
Lal2g0548 1136 Gene3D Transferase(Phosphotransferase) domain 1 221 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0548 Lal-Chr2 3309250 3315813 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0548 232 341 Receptor kinase-like Gene Family AT4G23150 63.393 1.02e-37 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal2g0548 PK_Tyr_Ser-Thr 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0548 - - gmx:112998545 1078.93