Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0547 ATGTGCATCTCTTTAACTTGTGTGGTTGTGGGCACCAATTCATACAAAATGGTTATTCTTTTCATTGCCAACCTACTACTCTTGTTCTCTGAAATCTCCACTGCTACTGATACCATTACCCAGATTGAATCACTTCCTGATGATGGCAGCACCTTGGTTTCTAGTGATGGAAGTTTTGAGTTAGGTTTCTTCAGTCCTGGTAGTTCTACAAATCGATATATAGGAATATGGTACAAGAATATTCCTGTTAGAGTTGTTGTTTGGGTTGCCAACCGTGACCATCCAATCAAACACAATTCCAGCAACTTGAGCATAGACAAAGAAGGAAACCTTATCCTTCTCAGCAAGAATGGCACAGTTCATTGGTCAATGAACTCCTCAACAAAGGCATTGAATCCCATTGTGAAGCTCTTGGATACTGGAAATTTAGTACTTAGAGAAGAGAATGATGATAGTAACAATGAAGATAGTTTCCTGTGGCAGAGCTTTGACCACCCCTGTGACACACTGTTACCAGGAATGAAGATGGGTTGGAACCTGAAGACTGGTCTTAATCGCCGTTTAACTGCGTGGAAGAATTGGGAAGACCCTTCCCCAGGGAACTTTACTTGGAGTACTGTCCTTACTGGCGACCCTGAAATGGTATTGTGGAATGGGAGTGTTAAGTTCCACAGGAGTGGTCCATGGAATGGTGTTGGATTTAGTGGAGCACCCTTATGGAAAGGTACTCCACTTTCGGAACACACTATGGTTAATAATGCAGATGAGGTGTATTACACATACAAGAGCGTGAACAAGTCTGTGATATCGATAACATATATAAACCAAACCCTTTATGTTCGTCAACGCATCACTTGGATTCCAGAAAACAATACTTGGAAGCTTTACCAATCTGTGCCAAGAGATAGCTGTGATACTTATAATCCTTGTGGTCCACATGGAAATTGCATTGTTAATGAGTCGCCAATTTGTCAGTGTTTAGAAGGATTCAAGCCCAAGTCACAACAAAATTGGGATGTCATGGACTGGACACAAGGTTGTGTGCGAAGCAAACCATGGATTTGTAGGGTCAAAGACAAAGATGGTTTTCTTAGGTTAACTGGCATGAAATTGCCAGATACTGCAAATTCTTGGGCTGACCGAAGCATGACACTAGAGGATTGCAAAGCCAAATGCTTGAAAAACTGCTCCTGCACGGCTTATGCAAACTTGGACGTGAGGGAAGCGGGTAGTGGTTGTGTCATTTGGTTTGGTGATCTCCTTGATCTGAGAATTTCAGACAGGGGACAAGATTTATATGTTAGAATGGCTGCTTCAGAGACTGATGCAAAGAAAGGACATAGTAAGAAAAAGGTTGTCATATTAGTTCCCCTTCTCTTCATTATTGTGATTGCACTCACTTTCACTTACATTTACTGGAGGAAAAGAAGGCTTAGAGGAAAAACTTTAGATGAAAATAAAGAAGAAAGACAAGAAGACTTGGAGCTGCCTTTATTTGATTTTGCAACAATGATACGTGCTACTAATGACTTTTCAAGTGATAAGAGGCTCGGCCAAGGTGGTTTTGGGCCTGTGTACAAGGGTACACTAGCTAATGGACAAGAGATTGCTGTCAAGAGGCTTTCACATAATTCTGGACAAGGAACCAAAGAATTCAAGAATGAAGTTATACTGTGTGCCAAACTTCAGCACCGGAATCTGGTTAAGGTTTTAGGTTGTTGCATCCATGGAGAGGAAAAACTACTCATCTATGAATACATGCCCAATAGAAGCCTAGATGCCTTTCTTTTTGATTCCTCTCAAAGTGAACTCCTCGATTGGTCAAAGCGCTTTAACATTATATATGGAATCGCAAGAGGACTTCTCTATCTTCATCATGATTCTAGATTAAGGATCATACACAGAGATCTTAAAGCAAGTAATATTTTGTTGGATAGTGAGTTGAACCCAAAAATTTCAGACTTTGGGATGGCACGAATGTTTATTGGAAATGAAACTGAAGGGAATACAAGAATAGTGGCAGGAACATATGGGTATATGGCTCCAGAGTATGCAATTGATGGACTCTTCTCCATCAAATCTGATGTATTTAGCTTTGGCGTATTACTATTGGAGATAGTAAGTGGAAAGAAAAACCGAGGAGTTTTCTACGCCGATCAAGGATATAATCTTTTAGGATATGCATGGGGACTGTGGAAGGAGGACACTCCAATGAAATTGATTGATTCCTGTTGTGGTGATACCGATGCTTTATCAGAAGTACTACGCTGCATCCATATCGGTCTTCTATGTGTGCAACTACATCCCGATGACAGGCCAAACATGACTTCAGTAATTCTGATGTTAAGCAGTGAAAATACTTTGCCTCAGCCTAAGAAGCCTGGTTTCCTCATTGAAAGGGAGTCTATTGCAGGAGAATCTTCATCTGGAAAACAGATTAGTTCTTCCACTAATGAAATTACAGTGACTCTATTAGAGGCTAGATAG 2487 0.4069 MCISLTCVVVGTNSYKMVILFIANLLLLFSEISTATDTITQIESLPDDGSTLVSSDGSFELGFFSPGSSTNRYIGIWYKNIPVRVVVWVANRDHPIKHNSSNLSIDKEGNLILLSKNGTVHWSMNSSTKALNPIVKLLDTGNLVLREENDDSNNEDSFLWQSFDHPCDTLLPGMKMGWNLKTGLNRRLTAWKNWEDPSPGNFTWSTVLTGDPEMVLWNGSVKFHRSGPWNGVGFSGAPLWKGTPLSEHTMVNNADEVYYTYKSVNKSVISITYINQTLYVRQRITWIPENNTWKLYQSVPRDSCDTYNPCGPHGNCIVNESPICQCLEGFKPKSQQNWDVMDWTQGCVRSKPWICRVKDKDGFLRLTGMKLPDTANSWADRSMTLEDCKAKCLKNCSCTAYANLDVREAGSGCVIWFGDLLDLRISDRGQDLYVRMAASETDAKKGHSKKKVVILVPLLFIIVIALTFTYIYWRKRRLRGKTLDENKEERQEDLELPLFDFATMIRATNDFSSDKRLGQGGFGPVYKGTLANGQEIAVKRLSHNSGQGTKEFKNEVILCAKLQHRNLVKVLGCCIHGEEKLLIYEYMPNRSLDAFLFDSSQSELLDWSKRFNIIYGIARGLLYLHHDSRLRIIHRDLKASNILLDSELNPKISDFGMARMFIGNETEGNTRIVAGTYGYMAPEYAIDGLFSIKSDVFSFGVLLLEIVSGKKNRGVFYADQGYNLLGYAWGLWKEDTPMKLIDSCCGDTDALSEVLRCIHIGLLCVQLHPDDRPNMTSVILMLSSENTLPQPKKPGFLIERESIAGESSSGKQISSSTNEITVTLLEAR 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0547 828 Pfam Domain of unknown function (DUF3403) 783 828 IPR021820 GO:0004674
Lal2g0547 828 ProSiteProfiles EGF-like domain profile. 300 336 IPR000742 -
Lal2g0547 828 Pfam S-locus glycoprotein domain 225 334 IPR000858 GO:0048544
Lal2g0547 828 CDD B_lectin 48 166 IPR001480 -
Lal2g0547 828 SMART serkin_6 511 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0547 828 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 45 821 - -
Lal2g0547 828 Gene3D Phosphorylase Kinase; domain 1 484 586 - -
Lal2g0547 828 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 197 IPR036426 -
Lal2g0547 828 SMART ntp_6 358 436 IPR003609 -
Lal2g0547 828 SMART blect_4 43 166 IPR001480 -
Lal2g0547 828 PIRSF SRK 11 828 IPR024171 GO:0004674
Lal2g0547 828 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Lal2g0547 828 ProSiteProfiles Protein kinase domain profile. 511 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0547 828 Gene3D Transferase(Phosphotransferase) domain 1 587 793 - -
Lal2g0547 828 Pfam Protein tyrosine and serine/threonine kinase 514 778 IPR001245 GO:0004672|GO:0006468
Lal2g0547 828 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 45 821 - -
Lal2g0547 828 CDD STKc_IRAK 517 782 - -
Lal2g0547 828 Pfam PAN-like domain 355 423 IPR003609 -
Lal2g0547 828 SUPERFAMILY Protein kinase-like (PK-like) 495 782 IPR011009 -
Lal2g0547 828 CDD PAN_AP_plant 358 437 - -
Lal2g0547 828 Pfam D-mannose binding lectin 86 192 IPR001480 -
Lal2g0547 828 Gene3D - 30 163 IPR036426 -
Lal2g0547 828 ProSiteProfiles PAN/Apple domain profile. 355 437 IPR003609 -
Lal2g0547 828 CDD EGF_CA 302 334 - -
Lal2g0547 828 ProSiteProfiles Bulb-type lectin domain profile. 36 158 IPR001480 -
Lal2g0547 828 Gene3D Hepatocyte Growth Factor 354 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0547 Lal-Chr2 3305060 3309136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0547 442 797 Receptor kinase-like Gene Family AT4G23190 52.893 8.03e-130 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal2g0547 PK_Tyr_Ser-Thr 5.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0547 - - gmx:100790436 1088.94