Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0546 ATGGCAGATGATAATCAATTCGAAGGAAGTGGAGAGTGGTGGGAATCATCAAGGAACATGAGGTTTGAAAGTGGGGATCAATCACACTCTTCCTCATCAGGACTCACTAACATAGGCAACTTTTGTTGGCAACAACAACAACAACATGACATGGTGGTGGATCACATGAAGACAAGATCTAATTCTTCCATGGATGGAAGAACTACCTCTGTGCAGGTTTTCCATGATAATCTTCAACAACAACAACAACAACAACAAGATTCTTGTGCCACTAATTCCACCAGTGACCACCCCAACTTGCATATGATGGGTTTAGGACTTTCATCTCAAGCCGTGGATTGGAATCAAGCATCTTTGCTAAGAGGTGAGAAAGCATCAGAGAGCAGTTTCAGGTCGATGCTGCAAGATAATTTGAGTTCATCAAACACCAATTTTCAGCATGAAACTGGGATTGGTTTATCTCAACAAGTTCAATGGAGGCCAGAAAATTCCACCAATGAATTCAAACAAGTGAATAATAGAGGTTTCTCTTTGGACCAAACTCAGTTTAGTCCTCAATATAGCTCCGGGGATAGTAATGTAACAAGCCAAGGTATACCCTCTACTTTTCACACGGATCATTACCCTTCAATATTGCAAGGGTTGTTAGGACCTGAAAGCAATCAACATCCGCAGCAAGGTTCATTTGAGAATATTCGACCCATGAATTTTCCATATTCAGCACGTTATGGCTTGAACTCTAACGATTTAATACATTCTTGGTCTGCTTCTAAAGTTCCTCAGTTCTTGAGAGCTTCACCGCCAAAACAACAACAACCCAATAACCAGTTACATTTCACTAACGACGCTCCTTTTTGGAATGCTTCTGAGGCTCCGGTAAAAGATGCTCGACCCAGCTTCTTTCCATCAATGCAACCACCATTTTCCACGCCAAATTTTCATGCACAATCAAAGAATATATCTGAAGTTAGGGACTCCGGTGCTGTGGTGAAGAAAAGTGGAAGTGAGCCTCCACCCAAAAGGCCAAGGAGTGAAACCCCATCACCTTTACCAGCTGTTAAGGTGAGAAAAGAGAAGATGGGAGACAGAATCACTGCACTCCAACAATTGGTTGCGCCTTTCGGAAAGACTGATACAGCCTCGGTGCTATCTGAAGCCATTGAATACATCAAATTTCTCCATGAACAAGTAACTGTTTTAAGCACCCCATATATGAAAAGTGGAGTTCCCACACAGCATCACCAGAATTCTGGTAAATCTAAGGAAGGCGAGGGGCCAAAGCAGGATCTTAGAAGCCGAGGGCTATGTTTGGTTCCAGTTTCTAGTACATTTCCAGTGACTCATGAACCCTCAATTGATTTTTGGACACCAACATTTGGAGGAACTTACAGATAA 1395 0.4237 MADDNQFEGSGEWWESSRNMRFESGDQSHSSSSGLTNIGNFCWQQQQQHDMVVDHMKTRSNSSMDGRTTSVQVFHDNLQQQQQQQQDSCATNSTSDHPNLHMMGLGLSSQAVDWNQASLLRGEKASESSFRSMLQDNLSSSNTNFQHETGIGLSQQVQWRPENSTNEFKQVNNRGFSLDQTQFSPQYSSGDSNVTSQGIPSTFHTDHYPSILQGLLGPESNQHPQQGSFENIRPMNFPYSARYGLNSNDLIHSWSASKVPQFLRASPPKQQQPNNQLHFTNDAPFWNASEAPVKDARPSFFPSMQPPFSTPNFHAQSKNISEVRDSGAVVKKSGSEPPPKRPRSETPSPLPAVKVRKEKMGDRITALQQLVAPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGVPTQHHQNSGKSKEGEGPKQDLRSRGLCLVPVSSTFPVTHEPSIDFWTPTFGGTYR 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0546 464 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 9 453 - -
Lal2g0546 464 CDD bHLH_AtbHLH_like 350 401 IPR045239 -
Lal2g0546 464 MobiDBLite consensus disorder prediction 79 98 - -
Lal2g0546 464 SMART finulus 350 399 IPR011598 GO:0046983
Lal2g0546 464 MobiDBLite consensus disorder prediction 406 430 - -
Lal2g0546 464 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 344 393 IPR011598 GO:0046983
Lal2g0546 464 PANTHER TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 9 453 - -
Lal2g0546 464 MobiDBLite consensus disorder prediction 322 353 - -
Lal2g0546 464 Gene3D - 354 409 IPR036638 GO:0046983
Lal2g0546 464 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 354 408 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0546 Lal-Chr2 3299194 3303699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0546 121 464 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 45.103 3.33e-73 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0546 - - lang:109352127 869.381