Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal2g0540 | ATGGCGATGAGGGCAGCAGTGGCGGCGGCGCCCCGCGGTTTCAGGCGATTTTTCTGCACAAACACAGCCTCTTCTCCTTTCCCATTCGTTCCTCCGCCGGCTGCAGGTGCCACTTCCGCTAGACAGATGGCGGATCCCAACACCAACCTCTTTGTCTCTGGGCTTAGCAAACGTACTACCACAGAAAGGCTACGGGAAGAATTTGCAAAGTTTGGTGAAGTTGTTCATGCTAGGGTGGTAACCGATAGAGTGTCAGGTTACTCTAAGGGGTTTGGTTTTGTGAAATATGCTACTATTGAAGAGGCTGCAAAGGGCATTGAAGGCATGGATGGCAAGTTTTTGGATGGTTGGGTCATATTTGCGGAGTACGCAAGACCAAGACCACCGCCAGGACAACCTATGCAGAATCCAACTCCTTATTATGGCGGACAGTGA | 435 | 0.5126 | MAMRAAVAAAPRGFRRFFCTNTASSPFPFVPPPAAGATSARQMADPNTNLFVSGLSKRTTTERLREEFAKFGEVVHARVVTDRVSGYSKGFGFVKYATIEEAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQPMQNPTPYYGGQ | 144 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal2g0540 | 144 | MobiDBLite | consensus disorder prediction | 125 | 144 | - | - | |
Lal2g0540 | 144 | PANTHER | GLYCINE-RICH RNA-BINDING PROTEIN 3, MITOCHONDRIAL-LIKE | 1 | 142 | - | - | |
Lal2g0540 | 144 | SUPERFAMILY | RNA-binding domain, RBD | 28 | 142 | IPR035979 | GO:0003676 | |
Lal2g0540 | 144 | Gene3D | - | 31 | 135 | IPR012677 | - | |
Lal2g0540 | 144 | SMART | rrm1_1 | 49 | 122 | IPR000504 | GO:0003723 | |
Lal2g0540 | 144 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 48 | 126 | IPR000504 | GO:0003723 | |
Lal2g0540 | 144 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 50 | 116 | IPR000504 | GO:0003723 | |
Lal2g0540 | 144 | PANTHER | TRANSFORMER-2-RELATED | 1 | 142 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal2g0540 | Lal-Chr2 | 3250956 | 3253394 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal2g0540 | 48 | 128 | Eukaryotic Initiation Factors Gene Family | AT1G49760 | 33.333 | 1.13e-08 | 50.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal2g0540 | - | - | gmx:100789351 | 213.001 |