Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0537 ATGCCAACAGTGTGGTTTTCTTTGAAGAAGTCTCTACACTGCAAATCTGAGCCATCTGATGTACATGACCCAAAATCAAGGAAGCATTTGAGCACAATCTTGACCAAGAGAGGAGGAAGATCAGGGTGTTCAAGGTCCATAGCAAATCTCAAAGATGTAATCCATGGAAGCAAGAGACATATTGAGAAGCCACCAGATTGCAGTCCAAGATCTATAGGGAGTAGTGAGTTCCTCAACCCTATAACTCATGAAGTAATTTTGAGTAACTCAAGGTGTGAGCTCAAAATCACTGGCTATGGAGGGTTCCAAGAAGGGGTTGTTAGCAATGGTGATGGTAACAATGCTACTGGTGATGGTGGTAATAGTAATGGTGGTTCAACATTTGTAGGTACTTTGAGGCCTGGGACACCTGGACCTGGAGGGCACCCTACAATGCATTACTTTAACCCCTCTTTTAGGACTTCATCAACTCCTCCAAGGAAATCTCCTTTCCTTTTGTCAGAAGGGTCTGGTTTTCATCACAGTGCTGCTGGAGCTGGACTTCATTCAAGCAATAGGATGTGTCTTGAGACAGATTCAAATGGTTCTTCAACTGTGACTTGCCATAAATGTGGAGAACAATTTAACAAATGGGAAGCTGCTGAAGCTCATCATCTATCCAAACATGCTGTTACTGAACTTGTGGAAGGTGATTCATCAAGGAAAATAGTGGAGATCATATGCAGGACAAGCTGGTTAAAGTCTGAGAACCACTGTGGTAGAATTGAGAGAGTTTTGAAAGTCCACAACATGCAAAAGACATTGGCTAGATTTGAAGAGTACAGGGAGATGGTGAAAATCAAAGCAAGCAAACTCCAAAAGAAGCATCCTAGGTGCCTGGCTGATGGAAATGAGCTTTTGAGATTCTATGGCACCATTGTTGCATGCTCTCTTGGTCACAATGGCTCTTCAAGTCTTTGCCTATCAGAAAAATGTTGTGTGTGTAGAATTATCAGAAATGGTTTTTCTGCCAAAAAGGAGCTCAGAGATGGTATAGGTGTTTTCACAACATCCACAAGTGGAAGAGCTTTTGAGTCTATAGAGATTATTGATGATGATCCATCACTTAGAAAAGCACTTATTGTTTGCAGAGTAATTGCTGGCAGGGTTCATAGGCCTCTGGAGAACATTCAGGAAATGGCAGCACAAACAGGCTTTGACTCATTGGCTGGAAAAGTTGGTCTTTATTCAAATATTGAGGAGCTTTATTTGCTCAATCCTAGAGCTCTTCTTCCTTGTTTTGTGGTAATTTGCAAACCTTGA 1302 0.4178 MPTVWFSLKKSLHCKSEPSDVHDPKSRKHLSTILTKRGGRSGCSRSIANLKDVIHGSKRHIEKPPDCSPRSIGSSEFLNPITHEVILSNSRCELKITGYGGFQEGVVSNGDGNNATGDGGNSNGGSTFVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRKSPFLLSEGSGFHHSAAGAGLHSSNRMCLETDSNGSSTVTCHKCGEQFNKWEAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENHCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLQKKHPRCLADGNELLRFYGTIVACSLGHNGSSSLCLSEKCCVCRIIRNGFSAKKELRDGIGVFTTSTSGRAFESIEIIDDDPSLRKALIVCRVIAGRVHRPLENIQEMAAQTGFDSLAGKVGLYSNIEELYLLNPRALLPCFVVICKP 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0537 433 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 433 - -
Lal2g0537 433 Gene3D - 214 432 - -
Lal2g0537 433 PANTHER - 2 433 - -
Lal2g0537 433 ProSitePatterns Zinc finger C2H2 type domain signature. 201 222 IPR013087 -
Lal2g0537 433 SUPERFAMILY ADP-ribosylation 224 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0537 Lal-Chr2 3235404 3238034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0537 1 433 C2H2 Transcription Factor Family AT5G54630 68.670 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal2g0537 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0537 - - lang:109355134 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0537 2 3235404 3238034 Lal2g0537 2 3235404 3238034 ECH
Lal2g0537 2 3235404 3238034 Lal9g0473 9 3142700 3144888 LSH