Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0523 ATGATGTCCAGGTCGTATACAAATCTTTTAGATTTGGCTTCTGGGAATTTCCCGGCAATGGGGAATCAGTTTAGGGAAAGGAAGCGGCTGTCAAGAGTTATGAGTGTTCCAGGGATTATCTCAGAATTGGATGATGATCAGGCTGTCAGTATTTCTTCTGATAATCCGTCAACTATTTCTACTGATAGAATGATCATTGTAGCAAACCAGCTACCTTTGAAAGCAAAGCGAAGAGAGGACAATAAAGGGTGGAGTTTCAGTTGGAATGAGGATTCCTTGCTTTTACAGCTTAAAGATGGACTTCCGGACGAGATGGAGGTTCTGTATGTCGGGTCTCTGCGTGTTGATATTGACCCGGCTGAACAGGATGATGTGTCACAGTATTTGTTGGACAAATTTAAATGTGTCCCAACTTTTCTACCCTCTGATGTTTTGGAGAAATTTTATGATGGCTTCTGTAAAAAACAGTTATGGCCACTTTTTCATTATATGTTACCGTTCACAACAAATGAAAGCCACCGTTTTGGCCGCTCATTGTGGGAAGCCTATGTGCTGGCAAATAAGCTGTTCTTTCAGAAGGTGGTTGAAATAATAAACCCAGAGGATGATTATATTTGGGTTCATGATTATCATTTGATGGTGCTGCCGACCTTTATAAGAAGGCGCTTTAACAGGGTTAAAATGGGATTTTTCTTGCATAGCCCCTTTCCATCATCAGAGATATATAGGACCCTTCCTGTCAGGGAAGAGATACTTAAAGCTTTACTAAACTCTGATATCATAGGATTCCATACCTTTGACTATGCCCGTCATTTCCTCTCCTGTTGCAGTCGTATGTTGGGTTTGGAATACCAGTCGAAGAGGGGCTATTTAGGATTGGAATATTATGGAAGGACTATCAGTATTAAGATTATGCCTGTTGGGATTCACATGGGTCGAATTGAATCTGTTATGAGAATGGCCGATGAGGAGTCCAAGGTTAGGGAGATCAAACAGAAATTTGAAGGAAAAACCATCTTGCTTGGTGTTGACGATATGGACATTTTTAAAGGCATAAATTTGAAGATTTTGGCTATGGAACAGATGCTCAAACAGCACCCAAAATGGCAAGGAAGATCTGTTCTTGTCCAGATAGTTAATCCTGCCAGGGGTAAAGGGATACATCTAGAGGAGATACAGGCCGAAATACAAGAAAGCTGCAGCAGGATCAACAGAGTATTTGGGCGTCCTGGTTATCAACCTATTGTTTTTATTGATAGATCGGTTTCAATTGCTGAAAAAGTTGCCTATTACAGCATGGCTGAGTGTGTTATTGTCACAGCTGTAAGGGATGGAATGAACCTAACTCCTTATGAATATATTGCTTGTAGACAGGGAATATCTGGTTCTGAATCATCTTCCAAAGCTAGCAGCCCAAAGAAGAGTATGTTAGTAGTATCAGAGTTTATTGGATGCTCTCCATCACTTAGTGGGGCTATTCGTATCAATCCGTGGAATGTTGAAGCAACTGCAGAAGCAATGAATGAGGCCATATCAATGAGCGAAGGAGAGAAACAGTTACGGCATGAAAAGCATTACCGATATGTCAGCACTCACGATGTGGCTTACTGGTCTCGTAGTTTCTTGCAAGACATGGAAAGGGCTTGCACAGACCTTCTAAGGAAAAGATGTTGGGGAATAGGTCTTAGCTTTGGATTTAGGGTTGTGGCACTTGACCCTAATTTTAAAAAGCTCTCCACTGATACTATGGTTTCAGCTTACCTGAGGGCAAGGAGTAGGGCCATTTTGTTGGACTATGATGGTACTGTGATGCCACAGAACTCCATCAATAAAAGTCCTAGCAAGGAGGTCATCTCTCTTTTGGAAACACTCTGTGCAGACCCCAAAAATGTAGTTTTTATTGTTAGTGGAAGGGGGAGGGCTAGTTTAAGCCAGTGGTTTACACCTTGCAAAAAACTTGGAGTTGCTGCAGAACATGGGTACTTCTTGAGTTGTTCAAAGATTACTTATTGCATCAAAGGTAACTCTTCGCCTGGTATGGTAGGCTTCCTTGGAGGGCGATGTTGGGAAGTAAGTCCCGCATCATGGTCACAGAGTGAAGATTGGGAAATTTGTGGCAAGAGCACCGATTTTGGATGGATGCAGATTGCTGAACCTGTAATGAAACTGTATACAGAGGCAACTGATGGTTCCAGCATTGAAAAGAAGGAAAGTGCTTTGGTCTGGCAATACCGGGATGCCGATCTTGGTTTTGGATCTGCTCAGGCCAAGGAAATGTTAGATCATCTTGAAAGTGTTTTGGCCAATGAGCCTGTTGCTGCCAAGAGTGGGCAGTTCATTGTTGAAGTGAAGCCCCAGGATGTAAGCAAGGGTTTAGTTGCTGAAAAAATATTTTCATCAATGGCTGAGAAGGGCACACAAGCTGACTTTGTGCTGTGTGTTGGTGATGACAGATCAGATGAGGATATGTTTGAAGTAATTAGTAGTGCAATCTCAAGACATATTCTTTCCTCCAATGCTTCTGTTTTTGCATGCACAGTTGGACAAAAACCAAGCAAAGCTAAGTATTATCTGGATGATACTTCTGAAGTAATAAACATGCTGCAATCTTTGGCCGAAGAATCAGATTCTTCACCATCATGCATAGAAAAAGAAACTGGGGATTCCTCTCTAAGGCAAATGTGA 2685 0.419 MMSRSYTNLLDLASGNFPAMGNQFRERKRLSRVMSVPGIISELDDDQAVSISSDNPSTISTDRMIIVANQLPLKAKRREDNKGWSFSWNEDSLLLQLKDGLPDEMEVLYVGSLRVDIDPAEQDDVSQYLLDKFKCVPTFLPSDVLEKFYDGFCKKQLWPLFHYMLPFTTNESHRFGRSLWEAYVLANKLFFQKVVEIINPEDDYIWVHDYHLMVLPTFIRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGIHMGRIESVMRMADEESKVREIKQKFEGKTILLGVDDMDIFKGINLKILAMEQMLKQHPKWQGRSVLVQIVNPARGKGIHLEEIQAEIQESCSRINRVFGRPGYQPIVFIDRSVSIAEKVAYYSMAECVIVTAVRDGMNLTPYEYIACRQGISGSESSSKASSPKKSMLVVSEFIGCSPSLSGAIRINPWNVEATAEAMNEAISMSEGEKQLRHEKHYRYVSTHDVAYWSRSFLQDMERACTDLLRKRCWGIGLSFGFRVVALDPNFKKLSTDTMVSAYLRARSRAILLDYDGTVMPQNSINKSPSKEVISLLETLCADPKNVVFIVSGRGRASLSQWFTPCKKLGVAAEHGYFLSCSKITYCIKGNSSPGMVGFLGGRCWEVSPASWSQSEDWEICGKSTDFGWMQIAEPVMKLYTEATDGSSIEKKESALVWQYRDADLGFGSAQAKEMLDHLESVLANEPVAAKSGQFIVEVKPQDVSKGLVAEKIFSSMAEKGTQADFVLCVGDDRSDEDMFEVISSAISRHILSSNASVFACTVGQKPSKAKYYLDDTSEVINMLQSLAEESDSSPSCIEKETGDSSLRQM 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0523 894 SUPERFAMILY HAD-like 593 872 IPR036412 -
Lal2g0523 894 Gene3D Glycogen Phosphorylase B; 56 316 - -
Lal2g0523 894 Gene3D - 592 673 IPR023214 -
Lal2g0523 894 Gene3D - 752 883 IPR023214 -
Lal2g0523 894 MobiDBLite consensus disorder prediction 874 894 - -
Lal2g0523 894 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 667 IPR001830 GO:0003824|GO:0005992
Lal2g0523 894 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 695 883 IPR001830 GO:0003824|GO:0005992
Lal2g0523 894 CDD HAD_TPP 594 866 - -
Lal2g0523 894 Pfam Glycosyltransferase family 20 63 546 IPR001830 GO:0003824|GO:0005992
Lal2g0523 894 TIGRFAM T6PP: trehalose-phosphatase 710 872 IPR003337 GO:0003824|GO:0005992
Lal2g0523 894 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING), TREHALOSE-PHOSPHATASE-RELATED 1 667 - -
Lal2g0523 894 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING), TREHALOSE-PHOSPHATASE-RELATED 695 883 - -
Lal2g0523 894 Pfam Trehalose-phosphatase 596 862 IPR003337 GO:0003824|GO:0005992
Lal2g0523 894 CDD GT20_TPS 63 546 IPR001830 GO:0003824|GO:0005992
Lal2g0523 894 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 63 550 - -
Lal2g0523 894 Gene3D Glycogen Phosphorylase B; 317 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0523 Lal-Chr2 3144944 3149238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0523 1 878 Trehalose Biosynthesis Gene Families AT1G06410 74.487 0.0 1366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0523 K16055 - gmx:100800847 1553.88