Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0519 ATGGCTGAGAGAATACACACGTCTGAAGAGAACAAGAGCGAAGAAGACAGTGACATTGGAGCCAAACCCTCTTATCCAAGTTCTAAGAAGCGTTCATTATTGGACTTGAATGAAGAAGCTAAGGATGACAGCGTCACTGATGACATATTGGGCAGTGAAATCAGTAGTTATGAGAGATCATCTTCAGAAGGTAACAACAATTTGAGTAAGAATAATAAGTCAAGTGAAGAAGGGAAATTAGAGAGAGGAATAGTGAGGCCATATGTACGGTCCAAAATGCCAAGACTTCGTTGGACTCGTGACCTTCACCTAGCTTTTGTTCATGCTATTGAGAGGCTTGGTGGACAAGAAAGAGCAACACCCAAGTTAATTCTCCAGTTGATGGATGTAAGAGGACTAAGCATTGCACACGTGAAGAGTCATTTGCAGATGTATCGAAGTAAAAAGCTTGATGAGTCTGGCCAAGTTTTGTCCCAACATAGGGCAATGCAAGGAAGAGATCAAATTTATGAAATGTACGAAAGACTTGATGCCCAGGGGCACTTTGGGGTTGATAACAAAAAATTTCTACCATCATCTCTGATAATGAAACAACCTTATGATGACTTCAAAGTTCACGGATCTTCAAGATTTCAGCATGTTGGGCTTTTCAATAACAGTCACGTGATGAAAAGACCAAGTTCATTGTGGAGTAAAAATTCATTTTTATATGGCTCTAACAACAGAACCTTCCTTCAAAAGGATGAAAGGATTATTGAACCAACAAGCTCACACATATTTCATGCAAGGGATGGAAAAGTAGCAAGAAATGGGACTATTAAGAAGTGGCCTACAGGGGGAATTATGAGTGGATCAGAAGGAAATGAGAATCATGAATCTATTACTAACATTTTGTGGAATCATGAATCTATGAACAATAATGAATATCATTCTTGGGGTACAATCCTCCCCAAGCTTAGCACCCAGGTTGAAGACCTAAAAGATGGAATGCAATCATTCACAAAGGTTGAGTTGTCTCAACAACAAGAGGTCAAACCAGAGTTAGAAAAGTTGAAAGATGAAAAAGGTTCATCAAATTTTCTAGAGCTAAGGCTAAGGCAGGACTTGGGAAATGTTAGAGAGACAAAAGGAAGTTCACCTAGTGAACAGGAAATAAACACAATGCTTTCTCTTTCAATGTTCTCTGCACCATCATCAATGCAACAAGCCTGA 1212 0.3927 MAERIHTSEENKSEEDSDIGAKPSYPSSKKRSLLDLNEEAKDDSVTDDILGSEISSYERSSSEGNNNLSKNNKSSEEGKLERGIVRPYVRSKMPRLRWTRDLHLAFVHAIERLGGQERATPKLILQLMDVRGLSIAHVKSHLQMYRSKKLDESGQVLSQHRAMQGRDQIYEMYERLDAQGHFGVDNKKFLPSSLIMKQPYDDFKVHGSSRFQHVGLFNNSHVMKRPSSLWSKNSFLYGSNNRTFLQKDERIIEPTSSHIFHARDGKVARNGTIKKWPTGGIMSGSEGNENHESITNILWNHESMNNNEYHSWGTILPKLSTQVEDLKDGMQSFTKVELSQQQEVKPELEKLKDEKGSSNFLELRLRQDLGNVRETKGSSPSEQEINTMLSLSMFSAPSSMQQA 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0519 403 MobiDBLite consensus disorder prediction 1 19 - -
Lal2g0519 403 MobiDBLite consensus disorder prediction 49 73 - -
Lal2g0519 403 SUPERFAMILY Homeodomain-like 92 148 IPR009057 -
Lal2g0519 403 MobiDBLite consensus disorder prediction 32 48 - -
Lal2g0519 403 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 31 397 IPR044848 GO:0003700
Lal2g0519 403 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 94 149 IPR006447 GO:0003677
Lal2g0519 403 MobiDBLite consensus disorder prediction 1 79 - -
Lal2g0519 403 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 31 397 - -
Lal2g0519 403 Gene3D - 93 150 - -
Lal2g0519 403 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 90 150 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0519 Lal-Chr2 3112328 3116135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0519 85 155 G2-like Transcription Factor Family AT2G42660 71.831 6.50e-31 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal2g0519 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0519 - - lang:109337615 340.887