Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0516 ATGGAGGATACACAAGAAGATGCAGGCCCATCAGAGCAAAGACCATCCAACATGTCATTGTTGCCTTCAAATTTCGTTGAAAGACTTGGATCCGTTTCCTTGGACTCTCGGGACGAGATCTTAAATTATAAAGAATCATCTAAACATTCTAACCACGATGTTATGTCACCTCGGAAAGCATCAGAAATTCTCTGGCACACTGGAATGCTTTCAGAACCAATACCAAATGGTTTTTATTCAGTCATTCCGGAGAAAAGACTCAAGAAACTTTTTGATAGTATTCCTACTTTGGATGAACTTCATGCTTTGGGTGCAGAGGGTTTTCGGGCTGATGCCATTCTTGTAGATGCAGAGAAAGATAGAAAGCTATCCATGTTGAAGCAACTAATTGTGACATTAGTTAAAGGATTGAGCTCAAATCCAGCTGCGATGATTAAGAAGATAGCTGGATTAGTTGCTGATGTTTATAAGCGACCAACCGTGGAAAGTCCAGCAAAATCTGCACTGGATGAAACCTTGCACATGTTTGAGAATCGTGGTGTCCAGATGCTGGGGCAAATAAGGCATGGTTCATGCCGTCCTCGAGCTATATTATTTAAAGTACTAGCTGATACAGTAGGCCTTGAAAGCAGGCTTATGATGGGTTTTCCAAAGGATGGTGCTGCTGAATGTATAGACTCATACAAGCATATGTCTGTGGCTGTTGTATTAAATTCTGTGGAACTGCTGGTCGATCTCATGCGTTTCCCTGGCCAATTGTTGCCACAATCCACTAAGTCAATTTTTATGACACATATCTATGCAGCAGGAGAGAGTGATTCAGCAGAAAATGATTCTTGTGATTCACCATTAGAACCAAACAGTCCTTTATATGGGGTTTCAGAGAGTGTCGAGAAGGATGAAAACCTCCTATTCCATAAAAGATTTGAAGCGTCTTCAAATGTATCAGGCCTTTCCTTGCGAAATATGATGTTACGATCAAATACCAGTCTGGACAGGAAAATGAGTTTGTCTCATAGTGAACCCAATATTGCAACTGCATTTAGTCGGCGTGGTCGGAGAAAGGTCGTTGCTGAACAGAGGACTGCTAGTTCAAGTCCAGAACATCCATCATTCCAAGGACATCGACGATCCATGCTTAGTGGTGGCAGGACACTTTTTAGAGAATTTGCTGATGACCAGGCTGCATCAAGATTCAGCTATAAGTCAGATGGTGTGTCCTCATCAGAAGAATGTAGGTCACGAAGAAGAAGCTTCAGCATTACTCCAGAGATTGGTGATGATATCGTAAGGGCTGTACGGGCAATGAATGAAACAATGAAGCAAAATCGTCTTTTGAGAGAAAGGGGGGATGGAAGTTCACTGTCCCATTCTTCTGATGCAGATATTCCGAAAAATGTGTCAAATTTACATGCCGATGGTCATGTTGAAAGGTCTCCTTTATATTCTCTTCATCGTGACCACATAACTTCACAGAAGGCAATGTCGTTACCCTCTTCACCACATGATTACAGAGGACAAGCGTCTGAAAGAAGCGGGCCATCGCGGAATGGAGTAAATCGTGAAATGGGGTCAACTTTGAATAGAGTCCTTGAATTACCGTTGTTCAATAATCGGCCTTTGTTACCATTTGAAGAATGGAATATTGACTTCTCAGAATTGACTGTTGGAACTCGTGTTGGGATTGAAGTTTTCCGTGGCATATGGAATGGCACAGATGTTGCAATCAAGGTTTTTCTGGAGCAAGATTTAACTGATGAAAACATGGAAGATTTCTGCAATGAAATAACCATTCTCAGCCGGCTCCGTCATCCTAATGTTATCTTATTTCTTGGTGCATGCACAAAGCCTCCACGTTTGTCAATGGTTACTGAATATATGGATATGGGATCCTTGTACTACTTGATTCATTTGAGTGGTCAAAAGAAGAAGATTAGCTGGAGGAAAAGACTAAAGATGTTACGTGACATTTGCAGGGGCTTGATGCACATACATCGTATGAAGATTATTCACCGCGACGTGAAAAGTGCAAATTGTCTTGTGGACAAGCATTGGACAGTTAAAATCTGCGATTTTGGACTTTCAAGAATAATCACTGGTACTCCCATGACAGATGCTTCTTCTGCTGGAACTCCAGAATGGATGGCGCCTGAACTTATTCGAAGTGAACCATTCACTGAAAAATGTGACATCTTTAGCTTGGGAGTGATAATGTGGGAGCTCAGCACCTTAAGTAGGCCATGGGAAGGCATACCAGCAGAGAGGGTGGTTTATGCCGTTGCTAATGAGGGTTCCCGGTTGGAGATTCCCGAAGGCCCGTTGAGTAGGCTGATTTCAGAGTGTTGGGCAGAACCAAATGAGCGGCCAAGTTGTGAGGAAATCCTTTCTCGCTTGGAATTGCCCAAAGCCATTGTCTTGCCCCTTCACCGCCCTGTCCCCACCATTGAAGATACT 2454 0.4279 MEDTQEDAGPSEQRPSNMSLLPSNFVERLGSVSLDSRDEILNYKESSKHSNHDVMSPRKASEILWHTGMLSEPIPNGFYSVIPEKRLKKLFDSIPTLDELHALGAEGFRADAILVDAEKDRKLSMLKQLIVTLVKGLSSNPAAMIKKIAGLVADVYKRPTVESPAKSALDETLHMFENRGVQMLGQIRHGSCRPRAILFKVLADTVGLESRLMMGFPKDGAAECIDSYKHMSVAVVLNSVELLVDLMRFPGQLLPQSTKSIFMTHIYAAGESDSAENDSCDSPLEPNSPLYGVSESVEKDENLLFHKRFEASSNVSGLSLRNMMLRSNTSLDRKMSLSHSEPNIATAFSRRGRRKVVAEQRTASSSPEHPSFQGHRRSMLSGGRTLFREFADDQAASRFSYKSDGVSSSEECRSRRRSFSITPEIGDDIVRAVRAMNETMKQNRLLRERGDGSSLSHSSDADIPKNVSNLHADGHVERSPLYSLHRDHITSQKAMSLPSSPHDYRGQASERSGPSRNGVNREMGSTLNRVLELPLFNNRPLLPFEEWNIDFSELTVGTRVGIEVFRGIWNGTDVAIKVFLEQDLTDENMEDFCNEITILSRLRHPNVILFLGACTKPPRLSMVTEYMDMGSLYYLIHLSGQKKKISWRKRLKMLRDICRGLMHIHRMKIIHRDVKSANCLVDKHWTVKICDFGLSRIITGTPMTDASSAGTPEWMAPELIRSEPFTEKCDIFSLGVIMWELSTLSRPWEGIPAERVVYAVANEGSRLEIPEGPLSRLISECWAEPNERPSCEEILSRLELPKAIVLPLHRPVPTIEDT 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0516 818 Pfam Ethylene-responsive protein kinase Le-CTR1 59 253 - -
Lal2g0516 818 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 27 798 - -
Lal2g0516 818 MobiDBLite consensus disorder prediction 1 22 - -
Lal2g0516 818 MobiDBLite consensus disorder prediction 441 468 - -
Lal2g0516 818 SUPERFAMILY Protein kinase-like (PK-like) 533 800 IPR011009 -
Lal2g0516 818 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 27 798 - -
Lal2g0516 818 SMART serkin_6 554 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0516 818 Gene3D Transferase(Phosphotransferase) domain 1 629 804 - -
Lal2g0516 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 669 681 IPR008271 GO:0004672|GO:0006468
Lal2g0516 818 Pfam Protein tyrosine and serine/threonine kinase 563 798 IPR001245 GO:0004672|GO:0006468
Lal2g0516 818 MobiDBLite consensus disorder prediction 494 522 - -
Lal2g0516 818 ProSiteProfiles Protein kinase domain profile. 550 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0516 818 Gene3D Phosphorylase Kinase; domain 1 547 628 - -
Lal2g0516 818 MobiDBLite consensus disorder prediction 441 455 - -
Lal2g0516 818 CDD STKc_MAP3K-like 563 798 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0516 Lal-Chr2 3079890 3094539 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0516 1 798 MAP Kinase Kinase Kinase AT3G58640 66.913 0.0 1091
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Lal2g0516 PK_Tyr_Ser-Thr 1.1e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0516 - - gmx:100807193 1315.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0659 10 14398133 14418224 Lal2g0516 2 3079890 3094539 PCT
Lal8g0732 8 5226293 5241278 Lal2g0516 2 3079890 3094539 PCT