Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0501 ATGGCACAATTGCCACCAAGAGTTCCAAACATGTCACCAAGTTGGCCAGAATTCTCTTCTCACCAAAATATGTCTTCTCTCACAAGTATGCCATTGAATGCTGCAAACAGTAACCACCAACATCATTCTCAACAACAAAACAACAACACTTCATGGGTGGATGAGTTCTTAGACTTCTCCTCGGCTAGGCGTGGGGCCCACCGTCGATCGGTGAGTGACTCAATCACCTTCCTGGAGGCACCAAAGGTTGATGATCACAATGAGTTTGAGAGGTTTGATGATGAACAATTCTTGTCCATGTTCAATGATGAGGTTTCAGGGAATAATACCATGATGCCACCAACAACATTGTCCACATCCAACCCTTCTAGCCCTTCTGACCATACCAGCATCAATGATCACACAGGAAAAACAAACCAGGAGAATGAGAAGGAGCAGCATCAGCAGAAACAATTGAAGAGTGAATTAGAGGATGATGATGAAAGCCAATGCAAACAGGAAATCACAGAAGGTCCCAATGATAATAATAATAATAATGCAACAACTTTCTCCAATGACAGAATCACTGACCCCAAGAGGGTCAAAAGAATATTGGCAAATAGACAATCTGCGCAAAGATCTAGAGTGAGGAAGCTGCAATACATATCAGAACTTGAACGAAGTGTAACTTCATTACAGGCTGAAGTTTCAGTACTGTCTCCAAGGGTTGCATTTTTGGATCATCAACGTTTGCTTCTAAATGTAGACAATAGTGCTCTTAAGCAAAGAATAGCTGCTATGGCCCAAGACAAGATTTTCAAAGATGCACATCAAGAGGCACTGAAAAGAGAGATAGAGAGATTGAGGCAAGTGTACCGCCAACAAAACATAAAGAATATGGACAATGCAGCAGGGTCACAATCTCCATCCCTATCACCAAAACCAAGATGTGATACTCAGATTGAAAAGGAGCAAATTAACTAG 963 0.4174 MAQLPPRVPNMSPSWPEFSSHQNMSSLTSMPLNAANSNHQHHSQQQNNNTSWVDEFLDFSSARRGAHRRSVSDSITFLEAPKVDDHNEFERFDDEQFLSMFNDEVSGNNTMMPPTTLSTSNPSSPSDHTSINDHTGKTNQENEKEQHQQKQLKSELEDDDESQCKQEITEGPNDNNNNNATTFSNDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAAMAQDKIFKDAHQEALKREIERLRQVYRQQNIKNMDNAAGSQSPSLSPKPRCDTQIEKEQIN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0501 320 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 318 - -
Lal2g0501 320 Coils Coil 137 159 - -
Lal2g0501 320 MobiDBLite consensus disorder prediction 104 187 - -
Lal2g0501 320 MobiDBLite consensus disorder prediction 1 48 - -
Lal2g0501 320 Coils Coil 271 291 - -
Lal2g0501 320 MobiDBLite consensus disorder prediction 168 187 - -
Lal2g0501 320 SUPERFAMILY Leucine zipper domain 192 246 IPR046347 GO:0003700|GO:0006355
Lal2g0501 320 Pfam bZIP transcription factor 192 235 IPR004827 GO:0003700|GO:0006355
Lal2g0501 320 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 190 242 IPR004827 GO:0003700|GO:0006355
Lal2g0501 320 PANTHER BASIC LEUCINE ZIPPER 34 1 318 - -
Lal2g0501 320 MobiDBLite consensus disorder prediction 13 48 - -
Lal2g0501 320 MobiDBLite consensus disorder prediction 137 160 - -
Lal2g0501 320 CDD bZIP_plant_RF2 193 243 IPR044759 GO:0003700|GO:0006355
Lal2g0501 320 MobiDBLite consensus disorder prediction 104 136 - -
Lal2g0501 320 Gene3D - 191 263 - -
Lal2g0501 320 SMART brlzneu 188 252 IPR004827 GO:0003700|GO:0006355
Lal2g0501 320 MobiDBLite consensus disorder prediction 292 320 - -
Lal2g0501 320 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 195 210 IPR004827 GO:0003700|GO:0006355
Lal2g0501 320 MobiDBLite consensus disorder prediction 292 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0501 Lal-Chr2 3008054 3011831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0501 1 269 bZIP Transcription Factor Family AT3G58120 55.973 3.34e-94 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal2g0501 bZIP_1 3.3e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0501 - - lang:109363232 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0501 2 3008054 3011831 Lal9g0448 9 2947703 2951039 LSH